Categories
People Uncategorised

Dr Nela Rosic (DECRA Research Fellow)

nela1Overview

I grew up in Serbia and start thinking about Science due to my love for genetics. I received a BSc (Hons First Class) in Molecular Biology and Physiology and a MSc in Plant Biology from the University of Belgrade. After moving to Brisbane, I completed a PhD at the University of Queensland. I have been awarded with a UQ Postdoctoral Fellowship for Women (2011-2013) and a prestigious Discovery Early Career Researcher Award by ARC (2012-2014).

Research Interests

  • Reprogramming Symbiodinium epigenome for higher temperature conditions
    Coral reefs represent one of the most diverse marine ecosystems housing an estimated 25% of all marine species. Exposure to thermal stress has been recognized as an important abiotic factor leading to the loss of algal symbionts from coral tissue and coral bleaching. The goal of this project is to enhance our understanding of the capacity of coral algae to tolerate thermal stress using an ancient epigenetic mechanism DNA methylation for reprogramming their epigenomes.
  • Coral algae as a source of UV-absorbing compounds
    Reef-building corals form mutualistic symbioses with unicellular photosynthetic dinoflagellate of the genus Symbiodinium. Exposure to ultraviolet radiation especially when combined with thermal stress, has been recognized as an important abiotic factor leading to oxidative stress and break down of the coral-algal endosymbiosis. In nature, many marine organisms use Mycosporine-like Amino Acids (MAAs) as biological sunscreens in UV protection and the prevention of oxidative stress. Corals acquire MAAs from their symbiotic algae and diet. Until now the complete enzymatic pathway of MAA synthesis is not known nor is the extent of their regulation by environmental conditions.
  • Transcriptomics for detection of stress in coral
    Changes to the environment as a result of human activities can result in a range of impacts on reef building corals that include reduced concentrations of algal symbionts and coral bleaching. We investigate the expression of genes in the colonies of the reef-building coral during environmental perturbations including elevated sea temperatures and nutrient enrichment. Our results will provide new insights into the transcriptional profiles of the coral holobiont and transcriptional regulation prior bleaching. In addition, we will identify a range of potential stress biomarkers that could be used for the development of the early warning signs of stress in reef-building corals.

 AO13_1-scale

Publications

Book Chapter

  • Rosic, Nela (2013). DNA shuffling of cytochromes P450 for indigoid pigment production. In Ian R. Phillips, Elizabeth A. Shepherd and Paul R. Ortiz de Montellano (Ed.), Cytochrome P450 protocols 3rd ed. (pp. 205-224) New York, NY, United States: Humana Press. doi:10.1007/978-1-62703-321-3_18

Journal Article

Conference Publication

  • Rosic, N. and Dove, S. (2013). How can dinoflagellates help in reducing coral reef vulnerability to environmental stress?. In: M. Dennis Hanisak, James A. Nienow and Akshinthala K. S. K. Prasad, Abstracts of Papers to be Presented at the 10th International Phycological Congress. 10th International Phycological Congress, Orlando, Florida, United States, (94-94). 4-10 August 2013.

  • Rosic, Nela, Pernice, Mathieu, Hoegh-Guldberg, Ove and Dove, Sophie (2011). Differential Regulation of Heat Shock Proteins and Cytochrome P450 Genes in Symbiotic Dinoflagellates Under Thermal Stress. In: Fifth European Phycological Congress: EPC5 Programme and Abstracts. 5th European Phycological Congress, Rhodes, Greece, (145-145). 04-09 September 2011. doi:10.1080/09670262.2011.613192

  • Rosic, Nela, Kaniewska, Pauline, Ling, Edmund, Edwards, David, Dove, Sophie and Hoegh-Guldberg, Ove (2011). Transcriptomics of the coral-algal symbiosis in response to environmental stress. In: Fifth European Phycological Congress: EPC5 Programme and Abstracts. 5th European Phycological Congress, Rhodes, Greece, (97-97). 04-09 September 2011. doi:10.1080/09670262.2011.613190

  • Rosic, Nedeljka, Lonhienne, Thierry G.A., DeVoss, James J. and Gillam, Elizabeth M.J. (2003). Directed evolution of mammalian cytochrome P450 enzymes involved in xenobiotic metabolism. In: Drug Metabolism Reviews: Proceedings 8th European Meeting of the International-Society-for-the-Study-of-Xenobiotics (ISSX). 8th European Meeting of the International-Society-for-the-Study-of-Xenobiotics (ISSX), Dijon, France, (46-46). 27 April – 1 May, 2003. doi:10.1081/DMR-120020120

Categories
People Uncategorised

Mr Robert Mason

Heron_Martin-48

Categories
People Uncategorised

Dr Pim Bongaerts

PimBongaerts3.jpg?itok=RWndFd8aPim is a post-doctoral research fellow in the CRE lab and lead scientist for the “Deep Reef” component of the Catlin Seaview Survey (www.catlinseaviewsurvey.com). The Deep Reef survey looks into the effects of climate change on one of the least known ecosystems on the planet – the deep-water reefs or mesophotic coral ecosystems (between 30-100m). The project aims to provide a comprehensive study of the biodiversity and connectivity of mesophotic reefs across the globe, with a major focus on the Great Barrier Reef, the Coral Sea and the Southern Caribbean.

 


 

Publications

  1. Bongaerts P, Carmichael M, Hay KB, Tonk L, Frade PR, Hoegh-Guldberg O (2015) Symbiont zonation plays a crucial role in the vertical distribution of coral species. Royal Society Open Science – in press
  2. Pantos O, Bongaerts P, Dove S, Hoegh-Guldberg O (2015) Microbial associations in the scleractinian coral Seriatopora hystrix across depths, locations and host/symbiont genotypes. ISME Journalin press
  3. Bongaerts P, Frade PR, Englebert N, Hay KB, Vermeij MJH, Hoegh-Guldberg O (2015) Deep down on a Caribbean reef: lower mesophotic depths harbor a specialized coral-endosymbiont community. Nature Scientific Reports 5:7652
  4. Muir P, Wallace C, Bridge TCL, Bongaerts P (2015) Diverse Staghorn Coral Fauna on the Mesophotic Reefs of North-East Australia. PLoS One – in press
  5. González-Rivero M, Bongaerts P, Beijbom O, Pizarro O, Friedman A, Rodriguez-Ramirez A, Upcroft B, Laffoley D, Kline DI, Vevers R, Hoegh-Guldberg O (2014) The Catlin Seaview Survey – kilometre-scale seascape assessment, and monitoring of coral reef ecosystems. Aquatic Conservationin press
  6. Englebert N* & Bongaerts P*, Muir P, Hay KB, Hoegh-Guldberg O (2014) Deepest zooxanthellate corals of the Great Barrier Reef and Coral Sea. Marine Biodiversityin press
  7. Bongaerts P, Frade PR, Ogier JJ, Hay KB, van Bleijswijk J, Englebert N, Vermeij MJH, Bak RPM, Visser PM, Hoegh-Guldberg O (2013) Sharing the slope: depth partitioning of agariciid corals and associated Symbiodinium across shallow and mesophotic habitats (2-60 m) on a Caribbean reef. BMC Evolutionary Biology 13:205
  8. Bongaerts P, Muir PR, Bridge TCL, Englebert N, Hoegh-Guldberg O (2013) Cyclone damage at mesophotic depths on Myrmidon Reef (GBR). Coral Reefs 32:935
  9. Bridge TCL, Hughes TP, Guinotte JM, Bongaerts P (2013) Call to protect all coral reefs. Nature Climate Change 3:528-530
  10. Tonk L* & Bongaerts P*, Sampayo EM, Hoegh-Guldberg (2013) SymbioGBR: a web-based database of Symbiodinium associated with cnidarian hosts on the Great Barrier Reef. BMC Ecology 13:7
  11. Foster R, Bridge T, Bongaerts P (2012) The first record of Hippocampus denise from Australia. Aqua – International Journal of Ichthyology 18:55-57
  12. Bongaerts P, Hoeksema B, Hay K, Hoegh-Guldberg O (2012) Mushroom corals overcome live burial through pulsed inflation. Coral Reefs 2:399
  13. Bongaerts P, Riginos C, Hay K, van Oppen MJH, Hoegh-Guldberg O, Dove S (2011) Adaptive divergence in a scleractinian coral: physiological adaptation of Seriatopora hystrix to shallow and deep reef habitats. BMC Evolutionary Biology 11:303 (cover article)
  14. Bridge TCL, Fabricius KE, Bongaerts P, Wallace CC, Muir P, Done TJ, Webster JM (2011) Diversity of Scleractinia and Octocorallia in the mesophotic zone of the Great Barrier Reef, Australia. Coral Reefs 31:179-189
  15. Bongaerts P, Sampayo EM, Bridge TLC, Ridgway T, Vermeulen F, Englebert N, Webster JM, Hoegh-Guldberg O (2011) Symbiodinium diversity of mesophotic coral communities on the GBR: a first assessment. Marine Ecology Progress Series 439:117-126
  16. Bongaerts P* & Bridge T*, Kline DI, Muir PR, Wallace CC, Beaman RJ, Hoegh-Guldberg O (2011) Mesophotic coral ecosystems on the walls of Coral Sea atolls. Coral Reefs 30:335
  17. Van Oppen MJH, Bongaerts P, Underwood JN, Peplow LM, Cooper TF (2011) The role of deep reefs in shallow reef recovery: an assessment of vertical connectivity in a brooding coral from west and east Australia. Molecular Ecology 20:1647-1660
  18. Bongaerts P, Riginos C, Ridgway T, Sampayo EM, van Oppen MJH, Englebert N, Vermeulen F, Hoegh-Guldberg O (2010) Genetic Divergence across Habitats in the Widespread Coral Seriatopora hystrix and its Associated Symbiodinium. PLoS One 5(5):e10871
  19. Bongaerts P, Ridgway T, Sampayo EM, Hoegh-Guldberg O (2010) Assessing the ‘deep reef refugia’ hypothesis: focus on Caribbean reefs. Coral Reefs 29:309–327
  20. Frade PR, Bongaerts P, Winkelhagen AJS, Tonk L, Bak RPM (2008) In situ photobiology of corals over large depth ranges: a multivariante analysis on the roles of environment, host and algal symbiont. Limnology and Oceanography 53:1-14
  21. Sampayo EM, Ridgway T, Bongaerts P, Hoegh-Guldberg O (2008) Bleaching susceptibility and mortality of corals are determined by fine-scale differences in symbiont type. PNAS 105:10444-10449

 

Categories
People Uncategorised

Dr. Benjamin P. Neal

 

Neal2 (1)

Contact
About
Outreach and Media
Publications
Photos

 

 

Contact
Coral Reef Ecosystems Lab / Catlin Seaview Survey
Global Change Institute, The University of Queensland
St Lucia, QLD, Australia, 4067
b.neal@uq.edu.au
Cell: +61 0421 727 846
Office: +61 7 336 56009

 

 

About

Research Interests

– Contemporary dynamics and change in tropical marine ecosystems
– Coral reef ecosystem response to global and local stressors
– Optical, remote, and in situ sensing and monitoring of coral reef ecosystems

Ben joins the Coral Reef Ecology Lab as a lead researcher for the Catlin Seaview Survey. Hailing from the Scripps Institution of Oceanography at the University of California, he works on coral reef image interpretation and analysis, generating coral cover and other ecological data, and creating outreach and scientific products. He completed his PhD in 2013, studying the growth and genetic response of Caribbean corals to thermal stress and bleaching. He has conducted marine research in a variety of tropical and temperate locations, has been a commercial fisherman in Alaska, and has worked for federal and state ocean management bodies in the United States. When not diving, he enjoys getting out into nature with his wife Loren, a professor of marine biology, and their young daughter Sonora.

Education

2013   Ph.D.   Scripps Institution of Oceanography, University of California San Diego: Marine Biology. Dissertation: Long-term coral recovery and endosymbiont changes following the major 2005 thermal disturbance in Bocas del Toro, Panama. Co-advisors: B. Greg Mitchell and Richard Norris.

2007   M.Sc.    Scripps Institution of Oceanography, University of California San Diego: Marine Biology. Co-advisors: Jeremy Jackson and Enric Sala.

1993   B.A.     Dartmouth College, Hanover, New Hampshire: Geography/Environmental Studies.

 

 

Outreach and Media

Media coverage of our work:

Time Magazine: Breaking the waves – Catlin Seaview Survey digitizes the endangered oceans

360 Degree Solomon Islands: A film from our expedition with the Khaled bin Sultan Living Oceans Foundation

EuroNews: Mapping the oceans’ coral reefs to try and save them from extinction

Dive the great reefs of the world on Google Street View: Mother Nature News

Jakarta MetroTV News: An underwater sketch of Karimunjawa National Park (in Bahasa Indonesian)

 

Blogs from recent expeditions:

Reflections on the Maldives (30 March – 21 April 2015)

Contemplating the Chagos Archipelago: Outpost for Coral (9 – 28 February 2015)

Catlin Seaview Survey joins forces with the Living Oceans Foundation in the Solomon Islands (30 October – 12 November 2014)

Karimunjawa National Park (13 September – 10 October 2014)

An introduction to Timor-Leste (23 July – 6 August 2014)

We’re off to the Philippines, first stop Tubbataha Reefs Natural Park (14 – 25 March 2014)

 

Peer Reviewed Publications

Neal, B. P.; R. N. Winter; H. Lin; T. Trebitz; D. Kline; B. G. Mitchell. Improved estimation of two-dimensional area of coral colonies from underwater photographs. In press: Environmental Monitoring and Assessment.

Beijbom, O.; Edmunds, P.J; Roelfsema, C.; Smith, J.; Kline, D.I.; Neal, B.P.; Dunlap, M.; Moriarty, V.; Fan, T.; Tan, C.; Chan, S.; Trebitz, T.; Gamst, A.; Mitchell, B.G.; Kriegman, D. Automated analysis of community composition in underwater imagery using machine learning enabled algorithms. PLOS ONE: DOI: 10.1371/journal.pone.0130312. 

Treibitz, T.; Neal, B.P.; Kline, D.I.; Beijbom, O.; Roberts, P.; Mitchell, B. G.; Kriegman, D. 2014. Wide Field-of-View Fluorescence Imaging of Coral Reefs. Nature Scientific Reports 5.

Lavi, A.; Neal, B.P.; Loya, Y.; Keren, R.; Eyal, G. A quick, easy, and non-intrusive method for underwater volume and surface area evaluation of benthic organisms by 3D computer modelling. Methods in Ecology and Evolution (DOI: 10.1111/2041-210X.12331).

McClenachan; L., Neal, B.P.; Al-Abdulrazzak, D., Witkin, T., Fisher, K., and Kittinger, J. 2014. Do Community Supported Fisheries (CSFs) improve sustainability? Fisheries Research 157:62-69.

Neal, B. P.; Condit, C.; dos Santos, S.; Liu, G.; Kahru, M.; Kline, D.; Mitchell, B.G. 2013. When depth is no refuge: Cumulative thermal stress increases with depth for corals in Bocas del Toro, Panama. Coral Reefs. 33:193-205.

Beijbom, O; Edmunds, P.J; Fan, T.; Smith, J.; Roelfsema, C.; Dunlap, M.; Moriarty, V.; Neal, B.P., Chan, S.; Treibitz, T.; Kline, D.I.; Mitchell, B.G.; Kriegman, D. 2012. Towards Automated Annotation of Scientific Image Data: A Coral Reef Ecology Study. IEEE Proceedings on Computer Vision and Pattern Recognition (CVPR).

Manuscripts in Progress

Neal, B. P.; Kline, D.; Coffroth, M.A. Changes in Symbiodinum genetic diversity and temporal variation over time and depth for three Caribbean corals. In preparation.

Neal, B. P.; Winter, R.; Treibitz, T.; Beijbom, O.; Kline, D.; Coffroth, M.A.; Mitchell, B. G. Long term, in-situ growth and recovery of the scleractinians Montastrea franksii and Siderastrea siderea following the 2005 Caribbean bleaching event. In preparation.

Selected Recent Presentations

Rapid, high definition, automated underwater sensing of coral reef ecosystems: The Catlin Seaview Survey. International Marine Conservation Congress, Glasgow, Scotland, 14-18 August 2014

Hydrological conditions contributing to the severe heat bleaching in the Caribbean in 2005. American Society of Limnology and Oceanography Aquatic Sciences Meeting, New Orleans, LA. 17-22 February 2013

Long term, in-situ growth and recovery of the scleractinian Montastrea franksii following the 2005 Caribbean bleaching event. International Coral Reef Symposium, Cairns, Australia. 9-13 July 2012

Semi-automated photographic processing of coral reef photographs from time series observations at Bocas del Toro, Panama. American Society of Limnology and Oceanography Aquatic Sciences Meeting, San Juan, Puerto Rico. 13-18 February 2011

 

 

Photos

Ben

Driving the SeaView-II (SV-II) camera system in the Maldives, with a camera calibration transect on the bottom

 

.IMG_5382

Healthy Acroporid corals and abundant fish in the western Maldives.

 

Chagos ben big coral

Surveying large coral colonies in the world’s largest marine protected area in the Chagos Archipelago (British Indian Ocean Territory).

Categories
People Uncategorised

Dr Alberto Rodriguez-Ramirez

BETO in field

Postdoctoral Research Fellow

CGRR Image Analysis and Data Base Manager

Global Change Institute, The University of Queensland

Room 708 (Level 7), Gehrmann Laboratories (Building #60),
St. Lucia, Brisbane, QLD 4072, Australia

E-mail: alberto.rodriguez@uq.edu.au

 

Alberto Rodríguez-Ramírez has been an active coral reef researcher for 17 years, studying and monitoring long-term trajectories in marine ecosystems, including seagrass and mangroves, as well as coral reefs in the Caribbean region and the Great Barrier Reef (GBR). He completed his PhD at The University of Queensland focusing on the reconstruction of historic disturbances to coral reefs, coral responses and water quality changes for the southern GBR using geochemical proxies from coral archives and secondary sources of information.

Currently he is the Image Analysis and Database Manger of the Catlin Global Reef Record, conducting the post-processing of coral reef images and quantitative/ecological analysis.

http://scholar.google.com.au/citations?user=0icKF9MAAAAJ&hl=en

 

PUBLICATIONS

Peer Review Journals

  1. Rodriguez-Ramirez A., CA Grove, J. Zinke, J.M. Pandolfi and J-x. Zhao. 2014. Coral Luminescence Identifies the Pacific Decadal Oscillation as a Primary Driver of River Runoff Variability Impacting the Southern Great Barrier Reef. PLoS ONE 9(1): e84305. doi:10.1371/journal.pone.
  2. van Tussenbroek B., Cortés, R. Collin, A.C. Fonseca, P.M.H. Gayle, H.M. Guzmán, G.E. Jácome, R. Juman, K.H. Koltes, H. A. Oxenford,  A. Rodriguez-Ramirez, J. Samper-Villarreal, S.R. Smith, J.J Tschirky, and E. Ernesto Weil. Caribbean. 2014. Wide, Long-Term Study of Seagrass Beds Reveals Local Variations, Shifts in Community Structure and Occasional Collapse. PLoS ONE 9(3): e90600. doi:10.1371/journal.pone.0090600
  3. Gonzalez-Rivero M., P. Bongaerts, O. Beijbom, O. Pizarro, A. Friedman, A. Rodriguez-Ramirez, B. Upcroft, D. Laffoley, D. Kline, R. Vevers, and O. Hoegh-Guldberg. 2014. The Catlin Seaview Survey – kilometre-scale seascape assessment, and monitoring of coral reef ecosystems. Aquatic Conserv: Mar. Freshw. Ecosyst. 24(Supp. 2): 184-198.
  4. Grove et al., (including  A. Rodriguez-Ramirez). In press. Spectral Luminescence Scanning: Updates and Developments. Special Issue, DPER volume: Micro-XRF Studies of Sediment Cores
  5. Rodriguez-Ramirez A. and F.A Zapata. 2012. An atypical corallum morphology in a species of Pocillopora. Coral Reefs, 31:253. doi 10.1007/s00338-011-0854-z.
  6. Eakin C.M., J.A. Morgan, S.F. Heron, T.B. Smith, G. Liu, L. Alvarez-Filip, B. Baca, E. Bartels, C. Bastidas, C. Bouchon, M. Brandt, A.W. Bruckner, L. Bunkley-Williams, A. Cameron, B.D. Causey, M. Chiappone, T.R.L. Christensen, M.J.C. Crabbe, O. Day, E. de la Guardia, G. Díaz-Pulido, D. DiResta, D.L. Gil-Agudelo, D.S. Gilliam, R.N. Ginsburg, S. Gore, H.M. Guzmán, J.C. Hendee, E.A. Hernández-Delgado, E. Husain, C.F.G. Jeffrey, R.J. Jones, E. Jordán-Dahlgren, L.S. Kaufman, D.I. Kline, P.A. Kramer, J.C. Lang, D. Lirman, J. Mallela, C. Manfrino, J.-P. Maréchal, K. Marks, J. Mihaly, W.J. Miller, E.M. Mueller, E.M. Muller, C.A. Orozco Toro, H.A. Oxenford, D. Ponce-Taylor, N. Quinn, K.B. Ritchie, S. Rodríguez, A. Rodriguez-Ramirez, S. Romano, J.F. Samhouri, J.A. Sánchez, G.P. Schmahl, B.V. Shank, W.J. Skirving, S.C.C. Steiner, E. Villamizar, S.M. Walsh, C. Walter, E. Weil, E. H. Williams, K.W. Roberson, and Y. Yusuf. 2010. Caribbean Corals in Crisis: Record Thermal Stress, Bleaching, and Mortality in 2005. PLoS ONE, 5(11): e13969. doi:10.1371/journal.pone.0013969.
  7. Rodriguez-Ramirez A., J. Garzon-Ferreira, A. Batista-Morales, D. L. Gil, D.I. Gomez-Lopez, K. Gomez-Campo, T. Lopez-Londoño, R. Navas-Camacho, M.C. Reyes-Nivia, and J. Vega-Sequeda. 2010. Temporal patterns in coral reef, seagrass and mangrove communities from Chengue bay CARICOMP site (Colombia): 1993-2008. Revista de Biología Tropical, 58 (Suppl. 3): 45-62.
  8. Rodriguez-Ramirez A., M.C. Reyes-Nivia, S. Zea, P. Herron, R. Navas-Camacho, J. Garzón-Ferreira, S. Bejarano, and C. Orozco.  2010. Recent dynamics and condition of coral reefs in the Colombian Caribbean. Revista de Biología Tropical, 58(Suppl. 1): 107-131.
  9. Garzón-Ferreira J. and A. Rodriguez-Ramirez. 2010. SIMAC: Development and implementation of a coral reef monitoring network in Colombia. Revista de Biología Tropical, 58(Suppl. 1): 67-80.
  10. Zapata F.A., A. Rodriguez-Ramirez, C. Caro-Zambrano, and J. Garzón-Ferreira. 2010. Mid-term coral-algal dynamics and conservation status of a Gorgona Island (Tropical Eastern Pacific) coral reef. Revista de Biología Tropical, 58(Suppl. 1): 81-94.
  11. Navas-Camacho R., A. Rodríguez-Ramírez, M.C. Reyes-Nivia, D.L. Gil-Agudelo, and J. Garzón-Ferreira. 2010.Coral diseases and bleaching on Colombian Caribbean coral reefs. Revista de Biología Tropical, 58(Suppl. 1): 95-106.
  12. Navas-Camacho R., A. Rodríguez-Ramírez, and M.C. Reyes-Nivia. 2010. Agents of coral mortality on reef formations of the Colombian Pacific. Revista de Biología Tropical, 58(Suppl. 1): 133-138.
  13. Sánchez J.A., R. Navas-Camacho, A. Rodríguez-Ramírez, P. Herron, V. Pizarro, A.R. Acosta, P.A. Castillo, J.C. Martínez , P. Montoya, and C. Orozco. 2010. White plague-like coral disease in remote reefs of the Western Caribbean Revista de Biología Tropical, 58(Suppl. 1): 145-154.
  14. Gil-Agudelo D.L., R. Navas-Camacho, A. Rodríguez-Ramírez, M.C. Reyes-Nivia, S. Bejarano, J. Garzón-Ferreira, and G.W. Smith. 2009. Enfermedades coralinas y su investigación en los arrecifes colombianos. Boletin de Investigaciones Marinas y Costeras, 38(2): 189-224.
  15. Paddack M.J., J.D. Reynolds, C. Aguilar, R.S. Appeldoorn, J. Beets, E.W Burkett, P.M. Chittaro, K. Clarke, R. Esteves, A.C. Fonseca, G.E Forrester, A.M. Friedlander, J. García-Sais, G. González-Sansón, L.K.B. Jordan, D.B. McClellan, M.W. Miller, P.P Molloy, P.J. Mumby, I. Nagelkerken, M. Nemeth, R. Navas-Camacho, J. Pitt, N.V.C. Polunin, M.C. Reyes-Nivia, D.R. Robertson,  A. Rodríguez-Ramírez, E. Salas, S.R.  Smith, R.E. Spieler, M.A. Steele, I.D. Williams, C.L. Wormald, A.R. Watkinson, and I.M. Côté. 2009. Recent region-wide declines in Caribbean reef fish abundance. Current Biology, 19(7): 590-595.
  16. Vega-Sequeda, J.,  A. Rodríguez-Ramírez, M.C. Reyes-Nivia, and R. Navas-Camacho. 2008. Formaciones coralinas del área de santa: estado y patrones de distribución espacial de la comunidad bentónica. Boletín de Investigaciones Marinas y Costeras, 37(2): 87-105.
  17. Rodríguez-Ramírez A. and M.C. Reyes-Nivia. 2008. Evaluación rápida de los efectos del huracán Beta en la Isla de Providencia (Caribe colombiano). Boletín de Investigaciones Marinas y Costeras, 37(1): 217-224.
  18. Olaya-Restrepo J., M.C. Reyes-Nivia, and A. Rodríguez-Ramírez. 2008. Ensamblajes de peces arrecifales del área de Santa Marta y el Parque Nacional Natural Tayrona. Boletín de Investigaciones Marinas y Costeras, 37(1): 111-127.
  19. Zapata F.A., A. Rodríguez-Ramírez, M. Rodríguez-Moreno, C. Muñoz, and M. López Victoria. 2007. Confirmation of the occurrence of the coral Pavona chiriquiensis (Cnidaria: anthozoa: Agariciidae) in the Colombian Pacific. Boletín de Investigaciones Marinas y Costeras, 36(1): 307-312.
  20. Reyes-Nivia M.C., J. Garzón-Ferreira, and A. Rodríguez-Ramírez. 2004. Depredación de coral vivo por peces en las bahías de Chengue y Gayraca, Parque Nacional Natural Tayrona (Caribe colombiano). Revista de Biología Tropical., 52(4): 883–895.
  21. Rodríguez-Ramírez A., J. Nivia-Ruíz, and J. Garzón-Ferreira. 2004. Características estructurales y funcionales del manglar de Avicennia germinans en la Bahía de Chengue (Caribe colombiano). Boletín de Investigaciones Marinas y Costeras, 33: 223-244.
  22. Reyes-Nivia M.C.,  A. Rodríguez-Ramírez, and J. Garzón-Ferreira. 2004. Peces asociados a arrecifes coralinos de cinco áreas del Caribe colombiano: listado de especies y nuevos registros. Boletín de Investigaciones Marinas y Costeras, 33: 101-116.
  23. Santodomingo N.,  A. Rodríguez Ramírez, and J. Garzón Ferreira. 2002. Territorios del pez Stegastes planifrons en formaciones coralinas del Parque Nacional Natural Tayrona, Caribe Colombiano: un panorama general. Boletín de Investigaciones Marinas y Costeras, 31: 65-84.
  24. Acero A.,  A. Rodríguez-Ramírez, and J. Garzón-Ferreira. 1995. Nomeus gronovii (Gmelin) (Pisces: Nomeidae) en el Caribe colombiano: primer registro para la costa noroccidental de América del Sur. Anales del Instituto de Investigaciones Marinas de Punta de Betin, 23: 173-176.
  25. Mejía L.S., O.D. Solano, and  A. Rodríguez-Ramírez. 1995. Ocho nuevos registros para la fauna íctica de Islas del Rosario, (Mar Caribe colombiano). Anales del Instituto de Investigaciones Marinas de Punta de Betin, 23: 189-192.

 

Books 

  1. Rodríguez-Ramírez A. and J. Garzón-Ferreira. 2003. Monitoreo de arrecifes coralinos, pastos marinos y manglares en la Bahía de Chengue (Caribe Colombiano): 1993-1999. INVEMAR, Serie de Publicaciones Especiales No.8, Santa Marta, 170p. ISBN 958-97264-6-1

 

Book Chapters 

  1. Rodríguez-Ramírez A., C. Bastidas, J. Cortés, H. Guzmán, Z. Leão, J. Garzón-Ferreira, R. Kikuchi, B. Padovani Ferreira, J.J. Alvarado, C. Jiménez, A.C. Fonseca, E. Salas, J. Nivia, C. Fernández, S. Rodríguez, D. Debrot, A. Croquer, D. Gil, D.I. Gómez, R.Navas-Camacho, M.C. Reyes-Nivia, A. Acosta, E. Alvarado, V. Pizarro, A. Sanjuan, P. Herrón, F.A. Zapata, S. Zea, M. López-Victoria, and J.A. Sánchez. 2008. Status of coral reefs and associated ecosystems in Southern Tropical America: Brazil, Colombia, Costa Rica, Panamá and Venezuela. pp 281-294. In: Wilkinson, C. (Ed.). Status of coral reefs of the world: 2008. Global Coral Reef Monitoring Network and Reef and Rainforest Research Centre, Townsville, Australia. ISSN 1447-6185.
  2. Rodríguez-Ramírez A., C. Bastidas, S. Rodríguez, Z. Leão, R. Kikuchi, M. Oliveira, D. Gil, J. Garzón-Ferreira, M.C. Reyes-Nivia, R.Navas-Camacho, N. Santodomingo, G. Díaz-Pulido, D. Venera-Ponton,L. Florez-Leiva, A. Rangel-Campo, C. Orozco, J.C Márquez, S. Zea, M. López-Victoria, J.A. Sánchez, and M.C. Hurtado. 2008. The effects of coral bleaching in the Southern Tropical America: Brazil, Colombia, and Venezuela. pp 105-114. In: Wilkinson C. and D. Souter (Eds.). Status of Caribbean coral reefs after the bleaching and hurricanes of 2005. GCRMN and RRRC, Townsville, Australia. ISSN 1447 6185
  3. Rodríguez-Ramírez A., R. Navas-Camacho, C. Reyes-Nivia, S. Bejarano-Chavarro, and J. Garzón-Ferreira. 2007. Implementación del SIMAC en la isla de Malpelo. pp 97-112. In: DIMAR-CCCP and UAESPNN-DTSO (Eds.). Santuario de Fauna y Flora Malpelo: descubrimiento en marcha, DIMAR, Bogotá. Colombia.
  4. Rodríguez-Ramírez A., J. Garzón-Ferreira, M.C. Reyes-Nivia, R. Navas-Camacho, S. Bejarano, G. Duque, and F.A. Zapata. 2006. Sistema nacional de monitoreo de arrecifes coralinos en Colombia Simac: logros y resultados 1998-2004. Tomo II. pp 365-370. In: Chaves M.E. and M. Santamaría (Eds). Informe nacional sobre el avance en el conocimiento y la información de la biodiversidad 1998 -2004. Instituto de Investigación de Recursos Biológicos Alexander von Humboldt. Bogotá D.C., Colombia. 2 Tomos. ISBN 958-8151-78-3
  5. Duque G., J. Garzón-Ferreira, and A. Rodríguez Ramírez. 2006. Funcionamiento y monitoreo de ecosistemas marinos. Tomo II. pp 352-364. In: Chaves M.E. and M. Santamaría (Eds). Informe nacional sobre el avance en el conocimiento y la información de la biodiversidad 1998-2004. Instituto de Investigación de Recursos Biológicos Alexander von Humboldt. Bogotá D.C., Colombia. 2 Tomos. ISBN 958-8151-78-3
  6. Garzón Ferreira J. (15 authors included  A. Rodríguez-Ramírez). 2006. SIMAC: Vigilando nuestros arrecifes coralinos. pp 72-73. In: 70 casos de investigación científica, tecnológica e innovación en Colombia 1990-2004. COLCIENCIAS, Bogotá, Colombia. ISBN 958-8290-13-9.
  7. Garzón-Ferreira J., J. Cortés, A. Croquer, H. Guzmán, Z. Leao, and  A. Rodríguez-Ramírez. 2004. Southern Tropical America: coral reef status and consolidation as GCRMN regional node. V2: pp 509-522. In: Wilkinson C. (Ed). Status of coral reefs of the world: 2004. AIMS, Townsville, Queensland, Australia. ISSN 1447-6185.
  8. Andrade A. (33 authors included A. Rodríguez-Ramírez). 2004. Ecosistemas. pp 105-216. In: Costa C. and C.A. Buitrago (Eds.): Informe anual sobre el estado del medio ambiente y los recursos naturales renovables de Colombia. IDEAM, Bogotá, Colombia.
  9. Rodríguez-Ramírez A. 2003. Peces bentónicos asociados a praderas de Thalassia testudinum en Isla Grande e Isla Rosario. pp 106-110. In: Díaz J.M., L.M Barrios., and D.I. Gómez-López (Eds). 2003. Las praderas de pastos marinos en Colombia: Estructura y distribución de un ecosistema estratégico. INVEMAR, Serie de publicaciones especiales No.10, Santa Marta, Colombia. ISBN 958-97301-9-5.
  10. Garzón-Ferreira J. and A. Rodríguez-Ramírez. 2003. Diez años de monitoreo en una pradera de Thalassia. pp 71-74. In: Díaz J.M., L.M Barrios., and D.I. Gómez-López (Eds). Las praderas de pastos marinos en Colombia: Estructura y distribución de un ecosistema estratégico. INVEMAR, Serie de Publicaciones Especiales No.10, Santa Marta, Colombia. ISBN 958-97301-9-5.
  11. Garzón-Ferreira J., J. Cortés, A. Croquer, H. Guzmán, Z. Leao, and A. Rodríguez-Ramírez. 2002. Status of coral reefs in Southern Tropical America in 2000-2002: Brazil, Colombia, Costa Rica, Panama and Venezuela. pp 343-348. In: Wilkinson C. (Ed). Status of coral reefs of the World: 2002. AIMS, Townsville. ISSN 1447-6185.
  12. Garzón-Ferreira J., J. Cortés, A. Croquer, H. Guzmán, Z. Leao, and A. Rodríguez-Ramírez. 2000. Status of coral reefs in Southern Tropical America: Brazil, Colombia, Costa Rica, Panama and Venezuela. pp 331-348. In: Wilkinson C. (Ed). Status of Coral Reefs of the World: 2000. AIMS, Townsville. ISBN 0642322090.

 

Conference Papers 

  1. Rodríguez-Ramírez A., M.C. Reyes-Nivia, R. Navas-Camacho, S. Bejarano, J. Garzón-Ferreira, and F.A. Zapata. 2006. Status of the coral reefs of Colombia in 2003. Proc. 10th Int. Coral Reef Symp., 976-981.
  2. CARICOMP (42 authors included A. Rodríguez-Ramírez). 2002. Status and temporal trends at CARICOMP coral reef sites. Proc. 9th Int. Coral Reef Symp.,1:325-330
  3. CARICOMP (22 authors included A. Rodríguez-Ramírez). 1997. Meteorological and oceanographic characterization of coral reef, seagrass and mangrove habitats in the Winder Caribbean. Proc. 8th Int. Coral Reef Symp., 1:657-662.
  4. CARICOMP (30 authors included A. Rodríguez-Ramírez). 1997. Studies on Caribbean coral bleaching, 1995-96. Proc. 8th Int. Coral Reef Symp., 1:673-678.
  5. Torres D., A. Rodríguez-Ramírez, L.S. Mejía, and C.A. Buitrago. 1992. Las comunidades del bajo arrecifal profundo Imelda, Isla Barú, Caribe colombiano: VII. Evaluación preliminar de la ictiofauna. Memorias del VIII seminario de ciencias y tecnologías del mar, 350-361.

 

Technical reports 

  1. CARICOMP (33 authors included A. Rodríguez-Ramírez). 2004. Caribbean Coastal Marine Productivity Program. 1993-2003. CARICOMP, 91pp. ISBN 97-66106-24-X
  2. Garzón-Ferreira J, M.C. Reyes-Nivia, and A. Rodríguez-Ramírez. 2002. Manual de métodos del SIMAC. INVEMAR, Santa Marta, Colombia, 102pp.
  3. Friedlander et al. (Several authors included A. Rodríguez-Ramírez). 2014. Colombia. pp 191-201. In: Jackson et al. (Eds.). Status and trends of Caribbean coral reefs: 1970-2012. GCRMN, IUCN, Gland, Switzerland.
Categories
People Uncategorised

Professor Ove Hoegh-Guldberg

Ove_Hoegh-Guldberg

Director GCI / ARC Laureate Fellow
Global Change Institute
oveh@uq.edu.au
+61 7 344 33112

 

Overview

Biography

Prof. Ove Hoegh-Guldberg (BScHons., Sydney; PhD., UCLA) is the inaugural Director of the Global Change Institute and Professor of Marine Science, at The University of Queensland, Brisbane, Australia.

Prof. Hoegh-Guldberg is deeply-motivated by a desire to communicate science effectively, undertake game-changing research and to find high-impact solutions to address several of the most pressing and serious challenges facing humanity worldwide, such as climate change, food security, clean energy and population growth.

In this respect Prof. Hoegh-Guldberg has actively collaborated with organisations such as the Great Barrier Reef Foundation, the Royal Society of London and The World Bank well as advising government and business on the science and urgency associated with climate change.

Prof. Hoegh-Guldberg has worked extensively with the media, believing that scientists need to extend the impact of their science using the full set of communication options. He has published works that include over 200 refereed publications and book chapters and is one of the most cited authors within the peer-reviewed literature on climate change and its impacts on natural ecosystems.

His interests in climate change has led to significant roles within the IPCC (coordinating lead author Chapter 30, “Open Oceans”) and other international organisations in his role as Deputy Director of the ARC Centre of Excellence for Coral Reef Studies, and as Coordinator for the Australasian Centre for Excellence and Chair of the Bleaching Working Group within the World Bank-Global Environment Facility Coral Reef Targeted Research Program.

As Director of the GCI Prof. Hoegh-Guldberg has a key role in engaging with the UQ community and external stakeholders to create opportunities and build strong external links and networks for the institute. He heads a large research laboratory (over 30 researchers &students) that focuses on how global warming and ocean acidification are affecting and will affect coral reefs.

Ove Hoegh-Guldberg heads Program 4 and is Deputy Director of the Australian Research Council Centre of Excellence for Coral Reef Studies. His research program receives considerable support from this important centre within Australian science.

Prof. Hoegh-Guldberg has held academic positions at UCLA, Stanford University,The University of Sydney and The University of Queensland and is a member of the Australian Climate Group; the Royal Society (London) Marine Advisory Network; and the Board of Editing Reviewers at Science Magazine. In 1999 he was awarded the Eureka Prize for his scientific research. He is the Queensland Smart State Premier’s Fellow (2008-2013). In 2012 he was awarded a Thomson Reuters Citation Award in recognition of his outstanding contribution to research and was awarded an Australian Research Council Laureate Fellowship. He is also the Chief Scientist for the Catlin Seaview Survey of the Great Barrier Reef.

Qualifications

BSc (Hons), The University of Sydney
PhD, U.C.L.A

Book Chapter

Coral reefs
Hoegh-Guldberg, Ove (2013). Coral reefs. In Jim Salinger (Ed.), Living in a warmer world (pp. 27-36) Auckand, New Zealand: David Bateman.

Coral reefs, climate change, and mass extinction
Hoegh-Guldberg, Ove (2012). Coral reefs, climate change, and mass extinction. In Lee Hannah (Ed.), Saving a million species: extinction risk from climate change (pp. 261-283) Washington, DC, United States: Island Press.

Implications of climate change for Asian-Pacific coastal and oceanic environments
Hoegh-Guldberg, Ove (2012). Implications of climate change for Asian-Pacific coastal and oceanic environments. In Robin Warner and Clive Schofield (Ed.), Climate change and the oceans: gauging the legal and policy currents in the Asia Pacific and beyond (pp. 21-50) Cheltenham, UK: Edward Elgar.

The impact of climate change on coral reef ecosystems
Hoegh-Guldberg, Ove (2011). The impact of climate change on coral reef ecosystems. In Zvy Dubins and Noga Stambler (Ed.), Coral reefs: an ecosystem in transition (pp. 391-403) Dordrecht, Netherlands: Springer.

An Introduction to the Great Barrier Reef
Hutchings, P.A., Kingsford, M.J. and Hoegh-Guldberg, O. (2008). An Introduction to the Great Barrier Reef. In Hutchings, P.A., Kingsford, M.J. and Hoegh-Guldberg, O. (Ed.), The Great Barrier Reef: Biology, Environment and Management (pp. 1-4) Collingwood, Victoria: CSIRO Publishing.

Calcification, Erosion and the Establishment of the Framework of Coral Reefs
Hutchings, P.A., Kingsford, M.J. and Hoegh-Guldberg, O. (2008). Calcification, Erosion and the Establishment of the Framework of Coral Reefs. In Hutchings, P.A., Kingsford, M.J. and Hoegh-Guldberg, O. (Ed.), The Great Barrier Reef: Biology, Environment and Management (pp. 74-84) Collingwood, Victoria: CSIRO Publishing.

Coral reefs and climate change: Susceptibility and consequences
Kleypas, J. and Hoegh-Guldberg, O. (2008). Coral reefs and climate change: Susceptibility and consequences. In Clive Wilkinson and David Souter (Ed.), Status of Caribbean coral reefs after bleaching and hurricanes in 2005 (pp. 19-28) Townsville, Qld, Australia: Global Coral Reef Monitoring Network and Reef and Rainforest Research Centre.

Epilogue
Hoegh-Guldberg, O. (2008). Epilogue. In Hutchings, P.A., Kingsford, M.J. and Hoegh-Guldberg, O. (Ed.), The Great Barrier Reef: biology, environment and management (pp. 369-370) Collingwood, Vic, Australia: CSIRO Publishing.

Primary Production, Nutrient Recycling and Energy Flow through Coral Reef Ecosystems
Hoegh-Guldberg, Ove and Dove, Sophia Gwendoline (2008). Primary Production, Nutrient Recycling and Energy Flow through Coral Reef Ecosystems. In Patricia Hutchins, Ove Hoegh-Guldberg and Michael John Kingsford (Ed.), The Great Barrier Reef: Biology, Environment and Management (pp. 59-73) Collingwood, Victoria: CSIRO Publishing.

The Future of Coral Reefs in a Rapidly Changing World
Hoegh-Guldberg, O. (2008). The Future of Coral Reefs in a Rapidly Changing World. In Hutchings, P.A., Kingsford, M.J. and Hoegh-Guldberg, O. (Ed.), The Great Barrier Reef: Biology, Environment and Management (pp. 95-107) Collingwood, Victoria: CSIRO Publishing.

Tropical marine ecosystems
Hoegh-Guldberg, Ove (2008). Tropical marine ecosystems. In David Lindenmayer, Stephen Dovers, Molly Harriss Olson and Steve Morton (Ed.), Ten commitments: reshaping the lucky country’s environment (pp. 51-58) Collingwood, VIC, Australia: CSIRO Publishing.

Vulnerability of coral reefs of the Great Barrier Reef to climate change
Fabricius, K. E., Hoegh-Guldberg, O., Johnson, J., McCook, L. and Lough, J. (2007). Vulnerability of coral reefs of the Great Barrier Reef to climate change. In Johnson, J. E. and Marshall, P. A. (Ed.), Climate Change and the Great Barrier Reef: A Vulnerability Assessment (pp. 515-554) Townsville, Queensland: Great Barrier Reef Marine Park Authority and The Australian Greenhouse Office.

Vulnerability of reef-building corals on the Great Barrier Reef to climate change
Hoegh-Guldberg, O., Anthony, K., Berkelmans, R., Dove, S., Fabricus, K., Lough, J., Marshall, P., van Oppen, M. J. H., Negri, A. and Willis, B. (2007). Vulnerability of reef-building corals on the Great Barrier Reef to climate change. In Johnson, J. E. and Marshall, P. A. (Ed.), Climate Change and the Great Barrier Reef: A Vulnerability Assessment (pp. 271-308) Townsville, Queensland: Great Barrier Reef Marine Park Authority and The Australian Greenhouse Office.

The Cell Physiology of Coral Bleaching
Dove, G. and Hoegh-Guldberg, I O (2006). The Cell Physiology of Coral Bleaching. In Jonathan T. Phinney, Ove Hoegh-Guldberg, Joanie Kleypas and William Skirving and Al Strong (Ed.), Coral Reefs and Climate Change: Science and Management (pp. 55-71) Washington, DC: American Geophysical Union.

Sizing the impact: Coral reef ecosystems as early casualties of climate change
Hoegh-Guldberg, I.O. (2001). Sizing the impact: Coral reef ecosystems as early casualties of climate change. In G. Walther, C. Burga and P. Edwards (Ed.), ‘Fingerprints’ of Climate Change: Adapted Behaviour & Shifting Species Ranges (pp. 203-228) London, UK: Kluwer Academic / Plenum Publishers.

Journal Article

Maps, laws and planning policy: working with biophysical and spatial uncertainty in the case of sea level rise
Bell, Justine, Saunders, Megan I., Leon, Javier X., Mills, Morena, Kythreotis, Andrew, Phinn, Stuart, Mumby, Peter J., Lovelock, Catherine E., Hoegh-Huldberg, Ove and Morrison, T. H. (2014) Maps, laws and planning policy: working with biophysical and spatial uncertainty in the case of sea level rise. Environmental Science and Policy, 44 247-257. doi:10.1016/j.envsci.2014.07.018

Unfolding the secrets of coral-algal symbiosis
Rosic, Nedeljka, Ling, Edmund Yew Siang, Chan, Chon-Kit Kenneth, Lee, Chin Hong, Kaniewska, Paulina, Edwards, David, Dove, Sophia and Hoegh-Guldberg, Ian Ove (2014) Unfolding the secrets of coral-algal symbiosis. The ISME Journal, . doi:10.1038/ismej.2014.182

Porites white patch syndrome: associated viruses and disease physiology
Lawrence S.A., Davy J.E., Wilson W.H., Hoegh-Guldberg O. and Davy S.K. (2014) Porites white patch syndrome: associated viruses and disease physiology. Coral Reefs, . doi:10.1007/s00338-014-1218-2

Transforming management of tropical coastal seas to cope with challenges of the 21st century
Sale, Peter F., Agardy, Tundi, Ainsworth, Carmeron H., Feist, Blake E., Bell, Johann D., Christie, Patrick, Hoegh-Guldberg, Ove, Mumby, Peter J., Feary, David A., Saunders, Megan I., Daw, Tim M., Foale, Simon J., Levin, Phillip S., Lindeman, Kenyon C., Lorenzen, Kai, Pomeroy, Robert S., Allison, Edward H., Bradbury, R. H., Corrin, Jennifer, Edwards, Alasdair J., Obura, David O., Sadovy de Mitcheson, Yvonne J., Samoilys, Melita A. and Sheppard, Charles R. C. (2014) Transforming management of tropical coastal seas to cope with challenges of the 21st century. Marine Pollution Bulletin, 85 1: 8-23. doi:10.1016/j.marpolbul.2014.06.005

Symbiodinium (Dinophyceae) diversity in reef-invertebrates along an offshore to inshore reef gradient near Lizard Island, Great Barrier Reef
Tonk, Linda, Sampayo, Eugenia M., LaJeunesse, Todd C., Schrameyer, Verena and Hoegh-Guldberg, Ove (2014) Symbiodinium (Dinophyceae) diversity in reef-invertebrates along an offshore to inshore reef gradient near Lizard Island, Great Barrier Reef. Journal of Phycology, 50 3: 552-563. doi:10.1111/jpy.12185

Coral reef sustainability through adaptation: glimmer of hope or persistent mirage?
Hoegh-Guldberg, Ove (2014) Coral reef sustainability through adaptation: glimmer of hope or persistent mirage?. Current Opinion in Environmental Sustainability, 7 127-133.

Effects of ocean warming and acidification on the energy budget of an excavating sponge
Fang, James K. H., Schönberg, Christine H. L., Mello-Athayde, Matheus A., Hoegh-Guldberg, Ove and Dove, Sophie (2014) Effects of ocean warming and acidification on the energy budget of an excavating sponge. Global Change Biology, 20 4: 1-12.

Deepest zooxanthellate corals of the Great Barrier Reef and Coral Sea
Englebert, N., Bongaerts, P., Muir, P., Hay, K. B. and Hoegh-Guldberg, O. (2014) Deepest zooxanthellate corals of the Great Barrier Reef and Coral Sea. Marine Biodiversity, . doi:10.1007/s12526-014-0221-8

Implications of geometric plasticity for maximizing photosynthesis in branching corals
Kaniewska, P., Anthony, K. R. N., Sampayo, E. M., Campbell, P. R. and Hoegh-Gulberg, O. (2014) Implications of geometric plasticity for maximizing photosynthesis in branching corals. Marine Biology, 161 2: 313-328.

Transcriptome Analysis of the Scleractinian Coral Stylophora pistillata
Karako-Lampert, Sarit, Zoccola, Didier, Salmon-Divon, Mali, Katzenellenbogen, Mark, Tambutte, Sylvie, Bertucci, Anthony, Hoegh-Guldberg, Ove, Deleury, Emeline, Allemand, Denis and Levy, Oren (2014) Transcriptome Analysis of the Scleractinian Coral Stylophora pistillata. Plos One, 9 2: .

Coral reefs in the anthropocene: persistence or the end of the line?
Hoegh-Guldberg, O. (2014) Coral reefs in the anthropocene: persistence or the end of the line?. Geological Society Special Publication, 395 1: 167-183.

Ensuring survival: oceans, climate and security
Mendler de Suarez, Janot, Cicin-Sain, Biliana, Wowk, Kateryna, Payet, Rolph and Hoegh-Guldberg, Ove (2014) Ensuring survival: oceans, climate and security. Ocean and Coastal Management, 90 27-37.

Geographical limits to species-range shifts are suggested by climate velocity
Burrows, Michael T., Schoeman, David S., Richardson, Anthony J., Molinos, Jorge Garcia, Hoffmann, Ary, Buckley, Lauren B., Moore, Pippa J., Brown, Christopher J., Bruno, John F., Duarte, Carlos M., Halpern, Benjamin S., Hoegh-Guldberg, Ove, Kappel, Carrie V., Kiessling, Wolfgang, O’Connor, Mary I., Pandolfi, John M., Parmesan, Camille, Sydeman, William J., Ferrier, Simon, Williams, Kristen J. and Poloczanska, Elvira S. (2014) Geographical limits to species-range shifts are suggested by climate velocity. Nature, 507 7493: 492-495.

Interdependency of tropical marine ecosystems in response to climate change
Saunders M.I., Leon J.X., Callaghan D.P., Roelfsema C.M., Hamylton S., Brown C.J., Baldock T., Golshani A., Phinn S.R., Lovelock C.E., Hoegh-Guldberg O., Woodroffe C.D. and Mumby P.J. (2014) Interdependency of tropical marine ecosystems in response to climate change. Nature Climate Change, 4 8: 724-729. doi:10.1038/nclimate2274

Assessing “Dangerous Climate Change”: required reduction of carbon emissions to protect young people, future generations and nature
Hansen, James, Kharecha, Pushker, Sato, Makiko, Masson-Delmotte, Valerie, Ackerman, Frank, Beerling, David J., Hearty, Paul J., Hoegh-Guldberg, Ove, Hsu, Shi-Ling, Parmesan, Camille, Rockstrom, Johan, Rohling, Eelco J., Sachs, Jeffrey, Smith, Pete, Steffen, Konrad, Van Susteren, Lise, von Schuckmann, Karina and Zachos, James C. (2013) Assessing “Dangerous Climate Change”: required reduction of carbon emissions to protect young people, future generations and nature. PLoS One, 8 12: e81648.1-e81648.26.

Sponge biomass and bioerosion rates increase under ocean warming and acidification
Fang, James K. H., Mello-Athayde, Matheus A., Schonberg, Christine H. L., Kline, David I., Hoegh-Guldberg, Ove and Dove, Sophie (2013) Sponge biomass and bioerosion rates increase under ocean warming and acidification. Global Change Biology, 19 12: 3581-3591.

Future reef decalcification under a business-as-usual CO2 emission scenario
Dove, Sophie G., Kline, David I., Pantos, Olga, Angly, Florent E., Tyson, Gene W. and Hoegh-Guldberg, Ove (2013) Future reef decalcification under a business-as-usual CO2 emission scenario. Proceedings of the National Academy of Sciences of the United States of America, 110 38: 15342-15347.

Sharing the slope: depth partitioning of agariciid corals and associated Symbiodinium across shallow and mesophotic habitats (2-60 m) on a Caribbean reef
Bongaerts, Pim, Frade, Pedro R., Ogier, Julie J., Hay, Kyra B., van Bleijswijk, Judith, Englebert, Norbert, Vermeij, Mark J. A., Bak, Rolf P. M., Visser, Petra M. and Hoegh-Guldberg, Ove (2013) Sharing the slope: depth partitioning of agariciid corals and associated Symbiodinium across shallow and mesophotic habitats (2-60 m) on a Caribbean reef. BMC Evolutionary Biology, 13 1: 205.1-205.14.

Host-Specific Interactions with Environmental Factors Shape the Distribution of Symbiodinium across the Great Barrier Reef
Tonk, Linda, Sampayo, Eugenia M., Weeks, Scarla, Magno-Canto, Marites and Hoegh-Guldberg, Ove (2013) Host-Specific Interactions with Environmental Factors Shape the Distribution of Symbiodinium across the Great Barrier Reef. Plos One, 8 7: 1-14.

Methods to quantify components of the excavating sponge Cliona orientalis Thiele, 1900
Fang, James K. H., Schonberg, Christine H. L., Kline, David I., Hoegh-Guldberg, Ove and Dove, Sophie (2013) Methods to quantify components of the excavating sponge Cliona orientalis Thiele, 1900. Marine Ecology, 34 2: 193-206.

Mixed responses of tropical Pacific fisheries and aquaculture to climate change
Bell, Johann D., Ganachaud, Alexandre, Gehrke, Peter C., Griffiths, Shane P., Hobday, Alistair J., Hoegh-Guldberg, Ove, Johnson, Johanna E., Le Borgne, Robert, Lehodey, Patrick, Lough, Janice M., Matear, Richard J., Pickering, Timothy D., Pratchett, Morgan S., Sen Gupta, Alex, Senina, Inna and Waycott, Michelle (2013) Mixed responses of tropical Pacific fisheries and aquaculture to climate change. Nature Climate Change, 3 6: 591-599.

Ocean acidification and warming scenarios increase microbioerosion of coral skeletons
Reyes-Nivia, Catalina, Diaz-Pulido, Guillermo, Kline, David, Guldberg, Ove-Hoegh and Dove, Sophie (2013) Ocean acidification and warming scenarios increase microbioerosion of coral skeletons. Global Change Biology, 19 6: 1919-1929.

Increased cell proliferation and mucocyte density in the sea anemone aiptasia pallida recovering from bleaching
Fransolet, David, Roberty, Stephane, Herman, Anne-Catherine, Tonk, Linda, Hoegh-Guldberg, Ove and Plumier, Jean-Christophe (2013) Increased cell proliferation and mucocyte density in the sea anemone aiptasia pallida recovering from bleaching. PLoS ONE, 8 5: e65015.1-e65015.7.

High natural gene expression variation in the reef-building coral Acropora millepora: potential for acclimative and adaptive plasticity
Granados-Cifuentes, Camila, Bellantuono, Anthony J., Ridgway, Tyrone, Hoegh-Guldberg, Ove and Rodriguez-Lanetty, Mauricio (2013) High natural gene expression variation in the reef-building coral Acropora millepora: potential for acclimative and adaptive plasticity. Bmc Genomics, 14 1: 228.1-228.12.

New-old hemoglobin-like proteins of symbiotic dinoflagellates
Rosic, Nedeljka N., Leggat, William, Kaniewska, Paulina, Dove, Sophie and Hoegh-Guldberg, Ove (2013) New-old hemoglobin-like proteins of symbiotic dinoflagellates. Ecology and Evolution, 3 4: 822-834.

SymbioGBR: a web-based database of Symbiodinium associated with cnidarian hosts on the Great Barrier Reef
Tonk, Linda, Bongaerts, Pim, Sampayo, Eugenia M. and Hoegh-Guldberg, Ove (2013) SymbioGBR: a web-based database of Symbiodinium associated with cnidarian hosts on the Great Barrier Reef. Bmc Ecology, 13 7.1-7.9.

Cyclone damage at mesophotic depths on Myrmidon Reef (GBR)
Bongaerts, P., Muir, P., Englebert, N., Bridge, T.C.L. and Hoegh-Guldberg, O. (2013) Cyclone damage at mesophotic depths on Myrmidon Reef (GBR). Coral Reefs, 32 4: 935-935.

Light from down under
Fine, Maoz, Sabbah, Shai, Shashar, Nadav and Hoegh-Guldberg, Ove (2013) Light from down under. Journal of Experimental Biology, 216 23: 4341-4346.

Limiting global warming to 2 degrees Celsius is unlikely to save most coral reefs
Frieler, K., Meinshausen, M., Golly, A., Mengel, M., Lebek, K., Donner, S. D. and Hoegh-Guldberg, O. (2013) Limiting global warming to 2 degrees Celsius is unlikely to save most coral reefs. Nature Climate Change, 3 2: 165-170.

Climate change and marine life
Richardson, Anthony J., Brown, Christopher J., Brander, Keith, Bruno, John F., Buckley, Lauren, Burrows, Michael T., Duarte, Carlos M., Halpern, Benjamin S., Hoegh-Guldberg, Ove, Holding, Johnna, Kappel, Carrie V., Kiessling, Wolfgang, Moore, Pippa J., O’Connor, Mary I., Pandolfi, John M., Parmesan, Camille, Schoeman, David S., Schwing, Frank, Sydeman, William J. and Poloczanska, Elvira S. (2012) Climate change and marine life. Biology Letters, 8 6: 907-909.

Coral thermal tolerance: tuning gene expression to resist thermal stress
Bellantuono, Anthony J., Granados-Cifuentes, Camila, Miller, David J., Hoegh-Guldberg, Ove and Rodriguez-Lanetty, Mauricio (2012) Coral thermal tolerance: tuning gene expression to resist thermal stress. PLoS One, 7 11: e50685.1-e50685.14.

Thermal priming affects symbiont photosynthesis but does not alter bleaching susceptibility in Acropora millepora
Middlebrook, Rachael, Anthony, Kenneth R. N., Hoegh-Guldberg, Ove and Dove, Sophie (2012) Thermal priming affects symbiont photosynthesis but does not alter bleaching susceptibility in Acropora millepora. Journal of Experimental Marine Biology and Ecology, 432-433 64-72.

The need for new ocean conservation strategies in a high-carbon dioxide world
Rau, Greg H., McLeod, Elizabeth L. and Hoegh-Guldberg, Ove (2012) The need for new ocean conservation strategies in a high-carbon dioxide world. Nature Climate Change, 2 10: 720-724.

Australian politicians’ beliefs about climate change: political partisanship and political ideology
Fielding, Kelly S., Head, Brian W., Laffan, Warren, Western, Mark and Hoegh-Guldberg, Ove (2012) Australian politicians’ beliefs about climate change: political partisanship and political ideology. Environmental Politics, 21 5: 712-733.

A single-cell view of ammonium assimilation in coral-dinoflagellate symbiosis
Pernice, Mathieu, Meibom, Anders, Van Den Heuvel, Annamieke, Kopp, Christophe, Domart-Coulon, Isabelle, Hoegh-Guldberg, Ove and Dove, Sophie (2012) A single-cell view of ammonium assimilation in coral-dinoflagellate symbiosis. Isme Journal, 6 7: 1314-1324.

Thermal stress promotes host mitochondrial degradation in symbiotic cnidarians: are the batteries of the reef going to run out?
Dunn, Simon R., Pernice, Mathieu, Green, Kathryn, Hoegh-Guldberg, Ove and Dove, Sophie G. (2012) Thermal stress promotes host mitochondrial degradation in symbiotic cnidarians: are the batteries of the reef going to run out?. PloS One, 7 7: 39024.1-39024.14.

Mushroom corals overcome live burial through pulsed inflation
Bongaerts, P., Hay, K., Hoegh-Guldberg, O. and Hoeksema, B. W. (2012) Mushroom corals overcome live burial through pulsed inflation. Coral Reefs, 31 2: 399-399.

Taxonomy and species boundaries in the coral genus Favia Milne Edwards and Haime, 1857 (Cnidaria: Scleractinia) from Thailand revealed by morphological and genetic data
Kongjandtre, N., Ridgway, T., Cook, L. G., Huelsken, T., Budd, A. F. and Hoegh-Guldberg, O. (2012) Taxonomy and species boundaries in the coral genus Favia Milne Edwards and Haime, 1857 (Cnidaria: Scleractinia) from Thailand revealed by morphological and genetic data. Coral Reefs, 31 2: 581-601.

The adaptation of coral reefs to climate change: Is the Red Queen being outpaced?
Hoegh-Guldberg, Ove (2012) The adaptation of coral reefs to climate change: Is the Red Queen being outpaced?. Scientia Marina, 76 2: 403-408.

A short-term in situ CO2 enrichment experiment on Heron Island (GBR)
Kline, David I., Teneva, Lida, Schneider, Kenneth, Miard, Thomas, Chai, Aaron, Marker, Malcolm, Headley, Kent, Opdyke, Brad, Nash, Merinda, Valetich, Matthew, Caves, Jeremy K., Russell, Bayden D., Connell, Sean D., Kirkwood, Bill J., Brewer, Peter, Peltzer, Edward, Silverman, Jack, Caldeira, Ken, Dunbar, Robert B., Koseff, Jeffrey R., Monismith, Stephen G., Mitchell, B. Greg, Dove, Sophie and Hoegh-Guldberg, Ove (2012) A short-term in situ CO2 enrichment experiment on Heron Island (GBR). Scientific Reports, 2 413.1-413.9.

Major cellular and physiological impacts of ocean acidification on a reef building coral
Kaniewska, Paulina, Campbell, Paul R., Kline, David I., Rodriguez-Lanetty, Mauricio, Miller, David J., Dove, Sophie and Hoegh-Guldberg, Ove (2012) Major cellular and physiological impacts of ocean acidification on a reef building coral. PLoS One, 7 4: e34659.1-e34659.12.

Ocean acidification reduces coral recruitment by disrupting intimate larval-algal settlement interactions
Doropoulos, Christopher, Ward, Selina, Diaz-Pulido, Guillermo, Hoegh-Guldberg, Ove and Mumby, Peter J. (2012) Ocean acidification reduces coral recruitment by disrupting intimate larval-algal settlement interactions. Ecology Letters, 15 4: 338-346.

Resistance to thermal stress in corals without changes in symbiont composition
Bellantuono, Anthony J., Hoegh-Guldberg, Ove and Rodriguez-Lanetty, Mauricio (2012) Resistance to thermal stress in corals without changes in symbiont composition. Proceedings of the Royal Society B – Biological Sciences, 279 1731: 1100-1107.

Interactions Between Ocean Acidification and Warming On the Mortality and Dissolution of Coralline Algae
Diaz-Pulido, Guillermo, Anthony, Kenneth R. N., Kline, David I., Dove, Sophie and Hoegh-Guldberg, Ove (2012) Interactions Between Ocean Acidification and Warming On the Mortality and Dissolution of Coralline Algae. Journal of Phycology, 48 1: 32-39.

Climate variability of the Great Barrier Reef in relation to the tropical Pacific and El Nino-Southern Oscillation
Redondo-Rodriguez, Ana, Weeks, Scarla, Berkelmans, Ray, Hoegh-Guldberg, Ove and Lough, Janice M. (2012) Climate variability of the Great Barrier Reef in relation to the tropical Pacific and El Nino-Southern Oscillation. Marine and Freshwater Research, 63 1: 34-47.

The future of coral reefs
Hoegh-Guldberg, Ove, Ortiz, Juan Carlos and Dove, Sophie (2011) The future of coral reefs. Science, 334 6062: 1494-1495.

The ecology of ‘Acroporid white syndrome’, a coral disease from the southern Great Barrier Reef
Roff, George, Kvennefors, E. Charlotte E., Fine, Maoz, Ortiz, Juan, Davy, Joanne E. and Hoegh-Guldberg, Ove (2011) The ecology of ‘Acroporid white syndrome’, a coral disease from the southern Great Barrier Reef. PLoS One, 6 12: e26829.1-e26829.13.

Adaptive divergence in a scleractinian coral: physiological adaptation of Seriatopora hystrix to shallow and deep reef habitats
Bongaerts, Pim, Riginos, Cynthia, Hay, Kyra B., van Oppen, Madeleine J.H., Hoegh-Guldberg, Ove and Dove, Sophie (2011) Adaptive divergence in a scleractinian coral: physiological adaptation of Seriatopora hystrix to shallow and deep reef habitats. BMC Evolutionary Biology, 11 1: 1-46.

Symbiodinium diversity in mesophotic coral communities on the Great Barrier Reef: a first assessment
Bongaerts, Pim, Sampayo, Eugenia M., Bridge, Thomas C. L., Ridgway, Tyrone, Vermeulen, Francisca, Englebert, Norbert, Webster, Jody M. and Hoegh-Guldberg, Ove (2011) Symbiodinium diversity in mesophotic coral communities on the Great Barrier Reef: a first assessment. Marine Ecology-Progress Series, 439 117-126.

Present limits to heat-adaptability in corals and population-level responses to climate extremes
Riegl, Bernhard M., Purkis, Bernhard M., Al-Cibahy, Ashraf S., Abdel-Moati, Mohammed A. and Hoegh-Guldberg, Ove (2011) Present limits to heat-adaptability in corals and population-level responses to climate extremes. PLoS One, 6 9: e24802-1-e24802-7.

Importance of macro- versus microstructure in modulating light levels inside coral colonies
Kaniewska, Paulina, Magnusson, Sveinn H., Anthony, Kenneth R. N., Reef, Ruth, Kühl, Michael and Hoegh-Guldberg, Ove (2011) Importance of macro- versus microstructure in modulating light levels inside coral colonies. Journal of Phycology, 47 4: 846-860.

Shared skeletal support in a coral-hydroid symbiosis
Pantos, Olga and Hoegh-Guldberg, Ove (2011) Shared skeletal support in a coral-hydroid symbiosis. PLoS One, 6 6: e20946.1-e20946.9.

Mesophotic coral ecosystems on the walls of Coral Sea atolls
Bongaerts, P., Bridge, T.C.L., Kline, D.I., Muir, P.R., Wallace, C.C., Beaman, R.J. and Hoegh-Guldberg, O. (2011) Mesophotic coral ecosystems on the walls of Coral Sea atolls. Coral Reefs, 30 2: 335-335.

Validation of housekeeping genes for gene expression studies in Symbiodinium exposed to thermal and light stress
Rosic, Nedeljka N., Pernice, Mathieu, Rodriguez-Lanetty, Mauricio and Hoegh-Guldberg, Ove (2011) Validation of housekeeping genes for gene expression studies in Symbiodinium exposed to thermal and light stress. Marine Biotechnology, 13 3: 355-365.

Difficult but not impossible
Hoegh-Guldberg, Ove, Hegerl, Gabi, Root, Terry, Zwiers, Francis, Stott, Peter, Pierce, David and Allen, Myles (2011) Difficult but not impossible. Nature Climate Change, 1 2: 72-72.

Ocean acidification and warming will lower coral reef resilience
Anthony, Kenneth R. N., Maynard, Jeffrey A., Diaz-Pulido, Guillermo, Mumby, Peter J., Marshall, Paul A., Cao, Long and Hoegh-Guldberg, Ove (2011) Ocean acidification and warming will lower coral reef resilience. Global Change Biology, 17 5: 1798-1808.

Coral reef ecosystems and anthropogenic climate change
Hoegh-Guldberg, Ove (2011) Coral reef ecosystems and anthropogenic climate change. Regional Environmental Change, 11 Supp. 1: S215-S227.

Revisiting climate thresholds and ecosystem collapse
Mumby, Peter J., Iglesias-Prieto, Roberto, Hooten, Anthony J., Sale, Peter F., Hoegh-Guldberg, Ove, Edwards, Alasdair J., Harvell, C. Drew, Gomez, Edgardo D., Knowlton, Nancy, Hatziolos, Marea E., Kyewalyanga, Margareth S. and Muthiga, Nyawira (2011) Revisiting climate thresholds and ecosystem collapse. Frontiers in Ecology and the Environment, 9 2: 94-96.

Regulation of apoptotic mediators reveals dynamic responses to thermal stress in the reef building coral Acropora millepora
Pernice, Mathieu, Dunn, Simon R., Miard, Thomas, Dufour, Sylvie, Dove, Sophie and Hoegh-Guldberg, Ove (2011) Regulation of apoptotic mediators reveals dynamic responses to thermal stress in the reef building coral Acropora millepora. PLoS One, 6 1: e16095.1-e16095.13.

Complex diel cycles of gene expression in coral-algal symbiosis
Levy, O., Kaniewska, P., Alon, S., Eisenberg, E., Karako-Lampert, S., Bay, L. K., Reef, R., Rodriguez-Lanetty, M., Miller, D. J. and Hoegh-Guldberg, O. (2011) Complex diel cycles of gene expression in coral-algal symbiosis. Science, 331 6014: 175-175.

Climate change impedes scleractinian corals as primary reef ecosystem engineers
Wild, Christian, Hoegh-Guldberg, Ove, Naumann, Malik S., Colombo-Pallotta, M. Florencia, Ateweberhan, Mebrahtu, Fitt, William K., Iglesias-Prieto, Roberto, Palmer, Caroline, Bythell, John C., Ortiz, Juan-Carlos, Loya, Yossi and van Woesik, Robert (2011) Climate change impedes scleractinian corals as primary reef ecosystem engineers. Marine and Freshwater Research, 62 2: 205-215.

Gene expression profiles of cytosolic heat shock proteins Hsp70 and Hsp90 from symbiotic dinoflagellates in response to thermal stress: Possible implications for coral bleaching
Rosic, Nedeljka N., Pernice, Mathieu, Dove, Sophie, Dunn, Simon and Hoegh-Guldberg, Ove (2011) Gene expression profiles of cytosolic heat shock proteins Hsp70 and Hsp90 from symbiotic dinoflagellates in response to thermal stress: Possible implications for coral bleaching. Cell Stress and Chaperones, 16 1: 69-80.

Increasing the accuracy of surface area estimation using single wax dipping of coral fragments
Veal, C. J., Carmi, M., Fine, M. and Hoegh-Guldberg, O. (2010) Increasing the accuracy of surface area estimation using single wax dipping of coral fragments. Coral Reefs, 29 4: 893-897.

Presence of Symbiodinium spp. in macroalgal microhabitats from the southern Great Barrier Reef
Venera-Ponton, D. E., Diaz-Pulido, G., Rodriguez-Lanetty, M. and Hoegh-Guldberg, O. (2010) Presence of Symbiodinium spp. in macroalgal microhabitats from the southern Great Barrier Reef. Coral Reefs, 29 4: 1049-1060.

Shallow-water wave lensing in coral reefs: A physical and biological case study
Veal, Cameron James, Carmi, Maya, Dishon, Gal, Sharon, Yoni, Michael, Kelvin, Tchernov, Dan, Hoegh-Guldberg, Ove and Fine, Maoz (2010) Shallow-water wave lensing in coral reefs: A physical and biological case study. Journal of Experimental Biology, 213 24: 4304-4312.

The Capricorn Eddy: A prominent driver of the ecology and future of the southern Great Barrier Reef
Weeks, S. J., Bakun, A., Steinberg, C. R., Brinkman, R. and Hoegh-Guldberg, O. (2010) The Capricorn Eddy: A prominent driver of the ecology and future of the southern Great Barrier Reef. Coral Reefs, 29 4: 975-985.

Analysis of evolutionarily conserved innate immune components in coral links immunity and symbiosis
Kvennefors, E. Charlotte E., Leggat, William, Kerr, Caroline C., Ainsworth, Tracy D., Hoegh-Guldberg, Ove and Barnes, Andrew C. (2010) Analysis of evolutionarily conserved innate immune components in coral links immunity and symbiosis. Developmental and Comparative Immunology, 34 11: 1219-1229.

Making a model meaningful to coral reef managers in a developing nation: A case study of overfishing and rock anchoring in Indonesia
Maynard, Jeffrey A., Anthony, Kenneth R. N., Afatta, Siham, Dahl-Tacconi, Nancy and Hoegh-Guldberg, Ove (2010) Making a model meaningful to coral reef managers in a developing nation: A case study of overfishing and rock anchoring in Indonesia. Conservation Biology, 24 5: 1316-1326.

Dangerous shifts in ocean ecosystem function?
Hoegh-Guldberg, O (2010) Dangerous shifts in ocean ecosystem function?. ISME JOURNAL, 4 9: 1090-1092.

Acute tissue death (white syndrome) affects the microenvironment of tabular Acropora corals
Andersen, SB, Vestergaard, ML, Ainsworth, TD, Hoegh-Guldberg, O and Kuhl, M (2010) Acute tissue death (white syndrome) affects the microenvironment of tabular Acropora corals. Aquatic Biology, 10 1: 99-104.

The impact of climate change on the world’s marine ecosystems
Hoegh-Guldberg, O and Bruno, JF (2010) The impact of climate change on the world’s marine ecosystems. Science, 328 5985: 1523-1528.

Assessing the ‘deep reef refugia’ hypothesis: Focus on Caribbean reefs
Bongaerts, P., Ridgway, T., Sampayo, E. M. and Hoegh-Guldberg, O. (2010) Assessing the ‘deep reef refugia’ hypothesis: Focus on Caribbean reefs. Coral Reefs, 29 2: 309-327.

Paleo-perspectives on ocean acidification
Pelejero, Carles, Calvo, Eva and Hoegh-Guldberg, Ove (2010) Paleo-perspectives on ocean acidification. Trends in Ecology and Evolution, 25 6: 332-344.

The relative contribution of dinoflagellate photosynthesis and stored lipids to the survivorship of symbiotic larvae of the reef-building corals
Harii, Saki, Yamamoto, Masanobu and Hoegh-Guldberg, Ove (2010) The relative contribution of dinoflagellate photosynthesis and stored lipids to the survivorship of symbiotic larvae of the reef-building corals. Marine Biology, 157 6: 1215-1224.

A comparative study of methods for surface area and three-dimensional shape measurement of coral skeletons
Veal, C. J., Holmes, G., Nunez, M., Hoegh-Guldberg, O. and Osborn, J. (2010) A comparative study of methods for surface area and three-dimensional shape measurement of coral skeletons. Limnology and Oceanography: Methods, 8 May: 241-253.

Differential regulation by heat stress of novel cytochrome P450 genes from the dinoflagellate symbionts of reef-building corals
Rosic, Nedeljka N., Pernice, Mathieu, Dunn, Simon, Dove, Sophia and Hoegh-Guldberg, Ove (2010) Differential regulation by heat stress of novel cytochrome P450 genes from the dinoflagellate symbionts of reef-building corals. Applied and Environmental Microbiology, 76 9: 2823-2829.

Genetic divergence across habitats in the widespread coral Seriatopora hystrix and its associated Symbiodinium
Bongaerts, Pim, Riginos, Cynthia, Ridgway, Tyrone, Sampayo, Eugenia M., van Oppen, Madeleine J. H., Englebert, Norbert, Vermeulen, Francisca and Hoegh-Guldberg, Ove (2010) Genetic divergence across habitats in the widespread coral Seriatopora hystrix and its associated Symbiodinium. PLoS One, 5 5: e001087:1-e001087:11.

Long-standing environmental conditions, geographic isolation and host-symbiont specificity influence the relative ecological dominance and genetic diversification of coral endosymbionts in the genus Symbiodinium
LaJeunesse, TC, Pettay, DT, Sampayo, EM, Phongsuwan, N, Brown, B, Obura, DO, Hoegh-Guldberg, O and Fitt, WK (2010) Long-standing environmental conditions, geographic isolation and host-symbiont specificity influence the relative ecological dominance and genetic diversification of coral endosymbionts in the genus Symbiodinium. JOURNAL OF BIOGEOGRAPHY, 37 5: 785-800.

Stramenopile microorganisms associated with the massive coral favia sp.
Siboni, Nachshon, Rasoulouniriana, Diana, Ben-Dov, Eitan, Kramarsky-Winter, Esti, Sivan, Alex, Loya, Yossi, Hoegh-Guldberg, Ove and Kushmaro, Ariel (2010) Stramenopile microorganisms associated with the massive coral favia sp.. Journal of Eukaryotic Microbiology, 57 3: 236-244.

Bacterial communities of two ubiquitous Great Barrier Reef corals reveals both site- and species-specificity of common bacterial associates
Kvennefors, E. Charlotte E., Sampayo, Eugenia, Ridgway, Tyrone, Barnes, Andrew Cartner and Hoegh-Guldberg, Ove (2010) Bacterial communities of two ubiquitous Great Barrier Reef corals reveals both site- and species-specificity of common bacterial associates. PLoS One, 5 4: e10401 – 1-e10401 – 14.

Heating rate and symbiont productivity are key factors determining thermal stress in the reef-building coral Acropora formosa
Middlebrook, Rachael, Anthony, Kenneth R.N., Hoegh-Guldberg, Ove and Dove, Sophie (2010) Heating rate and symbiont productivity are key factors determining thermal stress in the reef-building coral Acropora formosa. Journal of Experimental Biology, 213 7: 1026-1034.

Broadcast spawning patterns of Favia species on the inshore reefs of Thailand
Kongjandtre, N., Ridgway, T., Ward, S. and Hoegh-Guldberg, O. (2010) Broadcast spawning patterns of Favia species on the inshore reefs of Thailand. Coral Reefs, 29 1: 227-234.

Corrigendum
Rodriguez-Lanetty, Mauricio, Harii, Saki and Hoegh-Guldberg, Ove (2010) Corrigendum. Molecular Ecology, 19 5: 1071-1071.

The impact of benthic algae on the settlement of a reef-building coral
Diaz-Pulido, G, Harii, S, McCook, LJ and Hoegh-Guldberg, O (2010) The impact of benthic algae on the settlement of a reef-building coral. CORAL REEFS, 29 1: 203-208.

Early molecular responses of coral larvae to hyperthermal stress
Rodriguez-Lanetty, M, Harii, S and Hoegh-Guldberg, O (2009) Early molecular responses of coral larvae to hyperthermal stress. Molecular Ecology, 18 24: 5101-5114.

Effect of colony size and surrounding substrate on corals experiencing a mild bleaching event on Heron Island reef flat (southern Great Barrier Reef, Australia)
Ortiz, JC, Gomez-Cabrera, MD and Hoegh-Guldberg, O (2009) Effect of colony size and surrounding substrate on corals experiencing a mild bleaching event on Heron Island reef flat (southern Great Barrier Reef, Australia). CORAL REEFS, 28 4: 999-1003.

Coral skeletons defend against ultraviolet radiation
Reef, Ruth, Kaniewska, Paulina and Hoegh-Guldberg, Ove (2009) Coral skeletons defend against ultraviolet radiation. PLoS One, 4 11: Article No. e7995.

Biodiversity, climate change, and ecosystem services
Mooney, Harold, Larigauderie, Anne, Cesario, Manuel, Elmquist, Thomas, Hoegh-Guldberg, Ian O., Lavorel, Sandra, Mace, Georgia M, Palmer, Margaret, Scholes, Robert and Yahara, Tetsukazu (2009) Biodiversity, climate change, and ecosystem services. Current Opinion in Environmental Sustainability, 1 1: 46-54.

The coral reef crisis: The critical importance of <350 ppm CO2
Veron, J. E. N., Hoegh-Guldberg, Ian O., Lenton, T. M., Lough, J. M., Obura, D. O., Peace-Kelly, P., Sheppard, C. R. C., Spalding, M., Stafford-Smith, M. G. and Rogers, A. D. (2009) The coral reef crisis: The critical importance of <350 ppm CO2. Marine Pollution Bulletin, 58 10: 1428-1436.

Assisted migration: Part of an integrated conservation strategy
Vitt, Pati, Havens, Kayri and Hoegh-Guldberg, Ian O. (2009) Assisted migration: Part of an integrated conservation strategy. Trends In Ecology & Evolution, 24 9: 473-474.

Climate change and coral reefs: Trojan horse or false prophecy? A response to Maynard et al. (2008)
Hoegh-Guldberg, Ian O. (2009) Climate change and coral reefs: Trojan horse or false prophecy? A response to Maynard et al. (2008). Coral Reefs, 28 3: 569-575.

Photoreactivation is the main repair pathway for UV-induced DNA damage in coral planulae
Reef, R, Dunn, S, Levy, O, Dove, S, Shemesh, E, Brickner, I, Leggat, W and Hoegh-Guldberg, O (2009) Photoreactivation is the main repair pathway for UV-induced DNA damage in coral planulae. Journal of Experimental Biology, 212 17: 2760-2766.

Stability of coral-endosymbiont associations during and after a thermal stress event in the southern Great Barrier Reef
Stat, M, Loh, WKW, LaJeunesse, TC, Hoegh-Guldberg, O and Carter, DA (2009) Stability of coral-endosymbiont associations during and after a thermal stress event in the southern Great Barrier Reef. CORAL REEFS, 28 3: 709-713.

Response of two species of indo-pacific corals, porites cylindrica and stylophora pistillata, to short-term thermal stress: The host does matter in determining the tolerance of corals to bleaching
Fitt, W.K., Gates, R.D., Hoegh-Guldberg, O., Bythell, J.C., Jatkar, A., Grottoli, A.G., Gomez, M., Fisher, P., Lajuenesse, T.C., Pantos, O., Iglesias-Prieto, R., Franklin, D.J., Rodrigues, L.J., Torregiani, J.M., van Woesik, R. and Lesser, M.P. (2009) Response of two species of indo-pacific corals, porites cylindrica and stylophora pistillata, to short-term thermal stress: The host does matter in determining the tolerance of corals to bleaching. Journal of Experimental Marine Biology And Ecology, 373 2: 102-110.

A method for extracting a high-quality RNA from Symbiodinium sp.
Rosic, N. N. and Hoegh-Guldberg, O (2009) A method for extracting a high-quality RNA from Symbiodinium sp.. Journal of Applied Phycology, 22 2: 139-146.

Doom and boom on a resilient reef: Climate change, algal overgrowth and coral recovery
Diaz-Pulido, Guillermo, McCook, Laurence J., Dove, Sophie, Berkelmans, Ray, Roff, George, Kline, David I., Weeks, Scarla, Evans, Richard D., Williamson, David H. and Hoegh-Guldberg, Ove (2009) Doom and boom on a resilient reef: Climate change, algal overgrowth and coral recovery. PLoS One, 4 4: e5239.1-e5239.9.

Phototropic growth in a reef flat acroporid branching coral species
Kaniewska, P, Campbell, PR, Fine, M and Hoegh-Guldberg, O (2009) Phototropic growth in a reef flat acroporid branching coral species. Journal of Experimental Biology, 212 5: 662-667.

The big ecological questions inhibiting effective environmental management in Australia
Morton, SR, Hoegh-Guldberg, O, Lindenmayer, DB, Olson, MH, Hughes, L, McCulloch, MT, McIntyre, S, Nix, HA, Prober, SM, Saunders, DA, Andersen, AN, Burgman, MA, Lefroy, EC, Lonsdale, WM, Lowe, I, McMichael, AJ, Parslow, JS, Steffen, W, Williams, JE and Woinarski, JCZ (2009) The big ecological questions inhibiting effective environmental management in Australia. AUSTRAL ECOLOGY, 34 1: 1-9.

Bacterial communities closely associated with coral tissues vary under experimental and natural reef conditions and thermal stress
Ainsworth, TD and Hoegh-Guldberg, O (2009) Bacterial communities closely associated with coral tissues vary under experimental and natural reef conditions and thermal stress. Aquatic Biology, 4 3: 289-296.

An ancient and variable mannose-binding lectin from the coral Acropora millepora binds both pathogens and symbionts
Kvennefors, E.Charlotte E., Leggat, William, Hoegh-Guldberg, Ove, Degnan, Bernard M. and Barnes, Andrew C. (2008) An ancient and variable mannose-binding lectin from the coral Acropora millepora binds both pathogens and symbionts. Developmental and Comparative Immunology, 32 12: 1582-1592.

Linkages between coral assemblages and coral proxies of terrestrial exposure along a cross-shelf gradient on the southern Great Barrier Reef
Jupiter, S., Roff, G., Marion, G., Henderson, M., Schrameyer, V., McCulloch, M. and Hoegh-Guldberg, O. (2008) Linkages between coral assemblages and coral proxies of terrestrial exposure along a cross-shelf gradient on the southern Great Barrier Reef. Coral Reefs, 27 4: 887-903.

Symbiont acquisition strategy drives host-symbiont associations in the southern Great Barrier Reef
Stat, M., Loh, W.K.W., Hoegh-Guldberg, O. and Carter, D.A. (2008) Symbiont acquisition strategy drives host-symbiont associations in the southern Great Barrier Reef. Coral Reefs, 27 4: 763-772.

Where Species Go, Legal Protections Must Follow – Response
Hoegh-Guldberg, O., Hughes, L., Mcintyre, S., Lindenmayer, D. B., Parmesan, C., Possingham, H. P. and Thomas, C. D. (2008) Where Species Go, Legal Protections Must Follow – Response. Science, 322 5904: 1049-1050.

Ocean acidification causes bleaching and productivity loss in coral reef builders
Anthony, K. R. N., Kline, D. I., Diaz-Pulido, G., Dove, S. and Hoegh-Guldberg, O. (2008) Ocean acidification causes bleaching and productivity loss in coral reef builders. Proceedings of the National Academy of Sciences of the United States of America, 105 45: 17442-17446.

Host pigments: Potential facilitators of photosynthesis in coral symbioses
Dove, Sophie G., Lovell, Carli, Fine, Maoz, Deckenback, Jeffrey, Hoegh-Guldberg, Ove, Iglesias-Prieto, Roberto and Anthony, Kenneth R.N. (2008) Host pigments: Potential facilitators of photosynthesis in coral symbioses. Plant, Cell and Environment, 31 11: 1523-1533.

Imaging the fluorescence of marine invertebrates and their associated flora
Ainsworth, T. D., Hoegh-Guldberg, O. and Leggat, W. (2008) Imaging the fluorescence of marine invertebrates and their associated flora. Journal of Microscopy, 232 2: 197-199.

Variation in colony geometry modulates internal light levels in branching corals, Acropora humilis and Stylophora pistillata
Kaniewska, P., Anthony, K.R.N. and Hoegh-Guldberg, O. (2008) Variation in colony geometry modulates internal light levels in branching corals, Acropora humilis and Stylophora pistillata. Marine Biology, 155 6: 649-660.

A Call to Action for Coral Reefs
Dodge, R.E., Birkeland, C., Hatziolos, M., Kleypas, J., Palumbi, S.R., Hoegh-Guldberg, O., Van Woesik, R., Ogden, J.C., Aronson, R.B., Causey, B.D. and Staub, F. (2008) A Call to Action for Coral Reefs. Science, 322 5899: 189-190.

Early cellular changes are indicators of pre-bleaching thermal stress in the coral host
Ainsworth, T. D., Hoegh-Guldberg, O., Heron, S. F., Skirving, W. J. and Leggat, W. (2008) Early cellular changes are indicators of pre-bleaching thermal stress in the coral host. Journal of Experimental Marine Biology and Ecology, 364 2: 63-71.

Cellular processes of bleaching in the Mediterranean coral Oculina patagonica
Ainsworth, T. D. and Hoegh-Guldberg, O. (2008) Cellular processes of bleaching in the Mediterranean coral Oculina patagonica. Coral Reefs, 27 3: 593-597.

Bleaching susceptibility and mortality of corals are determined by fine-scale differences in symbiont type
Sampayo, E. M., Ridgway, T., Bongaerts, P. and Hoegh-Guldberg, O. (2008) Bleaching susceptibility and mortality of corals are determined by fine-scale differences in symbiont type. Proceedings of the National Academy of Sciences of the United States of America, 105 30: 10444-10449.

Assisted Colonization and Rapid Climate Change
Hoegh-Guldberg, O., Hughes, L., McIntyre, S., Lindenmayer, D.B., Parmesan, C., Possingham, H.P. and Thomas, C.D. (2008) Assisted Colonization and Rapid Climate Change. Science, 321 5887: 345-346.

Cell biology in model systems as the key to understanding corals
Weis, V.M., Davy, S.K., Hoegh-Guldberg, O., Rodriguez-Lanetty, M. and Pringe, J.R. (2008) Cell biology in model systems as the key to understanding corals. Trends in Ecology & Evolution, 23 7: 369-376.

Improved predictions of coral bleaching using seasonal baselines and higher spatial resolution
Weeks, S.J., Anthony, K.R.N., Bakun, A., Feldman, G.C. and Hoegh-Guldberg, O. (2008) Improved predictions of coral bleaching using seasonal baselines and higher spatial resolution. Limnology and Oceanography, 53 4: 1369-1375.

Coral disease physiology: the impact of Acroporid white syndrome on Symbiodinium
Roff, G., Kvennefors, E. C. E., Ulstrup, K. E., Fine, M. and Hoegh-Guldberg, O. (2008) Coral disease physiology: the impact of Acroporid white syndrome on Symbiodinium. Coral Reefs, 27 2: 373-377.

Analytical approach for selecting normalizing genes from a cDNA microarray platform to be used in q-RT-PCR assays: a cnidarian case study
Rodriguez-Lanetty, Mauricio, Phillips, Wendy S., Dove, Sophie, Hoegh-Guldberg, Ove and Weis, Virginia M. (2008) Analytical approach for selecting normalizing genes from a cDNA microarray platform to be used in q-RT-PCR assays: a cnidarian case study. Journal of Biochemical and Biophysical Methods, 70 6: 985-991.

Coral adaptation in the face of climate change: Response
Hoegh-Guldberg, O., Mumby, P. J., Hooten, A. J., Steneck, R. S., Greenfield, P., Gomez, E., Harvell, D. R., Sale, P. F., Edwards, A. J., Caldeira, K., Knowlton, N., Eakin, C. M., Iglesias-Prieto, R., Muthiga, N., Bradbury, R. H., Dubi, A. and Hatziolos, M. E. (2008) Coral adaptation in the face of climate change: Response. Science, 320 5874: 315-316.

Spatial heterogeneity of photosynthetic activity within diseased corals from the great barrier reef
Roff, George, Ulstrup, Karin E., Fine, Maoz, Ralph, Peter J. and Hoegh-Guldberg, Ove (2008) Spatial heterogeneity of photosynthetic activity within diseased corals from the great barrier reef. Journal of Phycology, 44 2: 526-538.

The effect of thermal history on the susceptibility of reef-building corals to thermal stress
Middlebrook, R., Hoegh-Guldberg, O. and Leggat, W. (2008) The effect of thermal history on the susceptibility of reef-building corals to thermal stress. Journal of Experimental Biology, 211 7: 1050-1056.

Biogeochemical responses following coral mass spawning on the Great Barrier Reef: pelagic-benthic coupling
Wild, C., Jantzen, C., Struck, U., Hoegh-Guldberg, O. and Huettel, M. (2008) Biogeochemical responses following coral mass spawning on the Great Barrier Reef: pelagic-benthic coupling. Coral Reefs, 27 1: 123-132.

A photosynthetic alveolate closely related to apicomplexan parasites
Moore, R.B., Obornik, M., Janouskovec, J., Chrudimsky, T., Vancova, M., Green, D.H., Wright, S.W., Davies, N.W., Bolch, C.J.S., Heimann, K., Slapeta, J., Hoegh-Guldberg, O., Logsdon, J.M. and Carter, D.A. (2008) A photosynthetic alveolate closely related to apicomplexan parasites. Nature, 451 7181: 959-963.

Acquisition of symbiotic dinoflagellates (Symbiodinium) by juveniles of the coral Acropora longicyathus
Gomez-Cabrera, M. del C., Ortiz, J. C., Loh, W. K. W., Ward, S. and Hoegh-Guldberg, O. (2008) Acquisition of symbiotic dinoflagellates (Symbiodinium) by juveniles of the coral Acropora longicyathus. Coral Reefs, 27 1: 219-226.

Bacteria are not the primary cause of bleaching in the Mediterranean coral Oculina patagonica
Ainsworth, T. D., Fine, M., Roff, G. and Hoegh-Guldberg, O. (2008) Bacteria are not the primary cause of bleaching in the Mediterranean coral Oculina patagonica. The ISME Journal, 2 1: 67-73.

Genetic connectivity patterns of Pocillopora verrucosa in southern African Marine Protected Areas
Ridgway, Tyrone, Riginos, Cynthia, Davis, Jasmine and Hoegh-Guldberg, Ove (2008) Genetic connectivity patterns of Pocillopora verrucosa in southern African Marine Protected Areas. Marine Ecology-Progress Series, 354 161-168.

Introduction: Effects of ocean acidification on marine ecosystems
Vezina, Alain F. and Hoegh-Guldberg, Ove (2008) Introduction: Effects of ocean acidification on marine ecosystems. Marine Ecology Progress Series, 373 199-201.

Coral reefs under rapid climate change and ocean acidification
Hoegh-Guldberg, O., Mumby, P. J., Hooten, A. J., Steneck, R. S., Greenfield, P., Gomez, E., Harvell, C. D., Sale, P. F., Edwards, A. J., Caldeira, K., Knowlton, N., Eakin, C. M., Iglesias-Prieto, R., Muthiga, N., Bradbury, R. H., Dubi, A. and Hatziolos, M. E. (2007) Coral reefs under rapid climate change and ocean acidification. Science, 318 5857: 1737-1742.

Len Muscatine (1932-2007) and his contributions to the understanding of algal-invertebrate endosymbiosis
Hoegh-Guldberg, O., Muller-Parker, G., Cook, C. B., Gates, R. D., Gladfelter, E., Trench, R. K. and Weis, V. M. (2007) Len Muscatine (1932-2007) and his contributions to the understanding of algal-invertebrate endosymbiosis. Coral Reefs, 26 4: 731-739.

Light-Responsive Cryptochromes from a Simple Multicellular Animal, the Coral Acropora millepora
Levy, O., Appelbaum, L., Leggat, W., Gothlif, Y., Hayward, D. C., Miller, D. J. and Hoegh-Guldberg, O. (2007) Light-Responsive Cryptochromes from a Simple Multicellular Animal, the Coral Acropora millepora. Science, 318 5849: 467-470.

A World with Corals: What Will It Take?
Schuttenberg, H. and Hoegh-Guldberg, O. (2007) A World with Corals: What Will It Take?. Science, 318 5847: 42-42.

Analysis of an EST library from the dinoflagellate (Symbiodinium sp.) symbiont of reef-building corals
Leggat, W., Hoegh-Guldberg, O., Dove, S. and Yellowlees, D. (2007) Analysis of an EST library from the dinoflagellate (Symbiodinium sp.) symbiont of reef-building corals. Journal of Phycology, 43 5: 1010-1021.

The hologenome theory disregards the coral holobiont
Leggat, William, Ainsworth, Tracy, Bythell, John, Dove, Sophie, Gates, Ruth, Hoegh-Guldberg, Ove, Iglesias-Prieto, Roberto and Yellowlees, David (2007) The hologenome theory disregards the coral holobiont. Nature Reviews Microbiology, 5 10: .

Nitrogen fixation by symbiotic cyanobacteria provides a source of nitrogen for the scleractinian coral Montastraea cavernosa
Lesser, M. P., Falcon, L. I., Rodriguez-Roman, A., Enriquez, S., Hoegh-Guldberg, O. and Iglesias-Prieto, R. (2007) Nitrogen fixation by symbiotic cyanobacteria provides a source of nitrogen for the scleractinian coral Montastraea cavernosa. Marine Ecology-progress Series, 346 143-152.

Comment on “Modern-age buildup of CO2 and its effects on seawater acidity and salinity” by Hugo A. Loáiciga
Caldeira, K., Archer, D., Barry, J. P., Bellerby, R. G. J., Brewer, P. G., Cao, L., Dickson, A. G., Doney, S. C., Elderfield, H., Fabry, V. J., Feely, R. A., Gattuso, J. P., Haugan, P. M., Hoegh-Guldberg, O., Jain, A. K., Kleypas, J. A., Langdon, C., Orr, J. C., Ridgwell, A., Sabine, C. L., Seibel, B. A., Shirayama, Y., Turley, C., Watson, A. J. and Zeebe, R. E. (2007) Comment on “Modern-age buildup of CO2 and its effects on seawater acidity and salinity” by Hugo A. Loáiciga. Geophysical Research Letters, 34 18: L18608-1-L18608-3.

Predominance of clade D Symbiodinium in shallow-water reef-building corals off Kish and Larak Islands (Persian Gulf, Iran)
Mostafavi, P. G., Fatemi, S. M. R., Shahhosseiny, M. H., Hoegh-Guldberg, O. and Loh, W. K. W. (2007) Predominance of clade D Symbiodinium in shallow-water reef-building corals off Kish and Larak Islands (Persian Gulf, Iran). Marine Biology, 153 1: 25-34.

Niche partitioning of closely related symbiotic dinoflagellates
Sampayo, Eugenia M., Franceschinis, Lorenzo, Hoegh-Guldberg, Ove and Dove, Sophie (2007) Niche partitioning of closely related symbiotic dinoflagellates. Molecular Ecology, 16 17: 3721-3733.

Are infectious diseases really killing corals? Alternative interpretations of the experimental and ecological data
Lesser, M. P., Bythell, J. C., Gates, R. D., Johnstone, R. W. and Hoegh-Guldberg, O. (2007) Are infectious diseases really killing corals? Alternative interpretations of the experimental and ecological data. Journal of Experimental Marine Biology and Ecology, 346 1-2: 36-44.

Bleaching, energetics, and coral mortality risk: Effects of temperature, light, and sediment regime
Anthony, Kenneth R. N., Connolly, Sean R. and Hoegh-Guldberg, Ove (2007) Bleaching, energetics, and coral mortality risk: Effects of temperature, light, and sediment regime. Limnology and Oceanography, 52 2: 716-726.

Phase shifts, herbivory, and the resilience of coral reefs to climate change
Hughes, Terence P., Rodrigues, Maria J, Bellwood, David R., Ceccarelli, Daniela, Hoegh-Guldberg, Ove, McCook, Laurence, Moltschaniwskyj, Natalie, Pratchett, Morgan S., Steneck, Robert S. and Willis, Bette (2007) Phase shifts, herbivory, and the resilience of coral reefs to climate change. Current Biology, 17 4: 360-365.

Climate change and Australian marine life
Poloczanska, E. S., Babcock, R. C, Butler, A., Hobday, A. J., Hoegh-Guldberg, O., Kunz, T. J., Matear, R., Milton, D. A, Okey, T. A. and Richardson, A. J. (2007) Climate change and Australian marine life. Oceanography and Marine Biology, 45 407-478.

Coral Disease Diagnostics: What’s between a Plague and a Band?
Ainsworth, T. D., Kramasky-Winter, E., Loya, Y., Hoegh-Guldberg, O. and Fine, M. (2007) Coral Disease Diagnostics: What’s between a Plague and a Band?. Applied And Environmental Microbiology, 73 3: 981-992.

Disease and cell death in white syndrome of Acroporid corals on the Great Barrier Reef
Ainsworth, T. D., Kvennefors, E. C., Blackall, L. L., Fine, M. and Hoegh-Guldberg, O. (2007) Disease and cell death in white syndrome of Acroporid corals on the Great Barrier Reef. Marine Biology, 151 1: 19-29.

Increased Prevalence of Ubiquitous Ascomycetes in an Acropoid Coral (Acropora formosa) Exhibiting Symptoms of Brown Band Syndrome and Skeletal Eroding Band Disease
Yarden, O., Ainsworth, T. D., Roff, G., Leggat, W., Fine, M. and Hoegh-Guldberg, O. (2007) Increased Prevalence of Ubiquitous Ascomycetes in an Acropoid Coral (Acropora formosa) Exhibiting Symptoms of Brown Band Syndrome and Skeletal Eroding Band Disease. Applied And Environmental Microbiology, 73 8: 2755-2757.

Phototrophic microendoliths bloom during coral “white syndrome”
Fine, M., Roff, G., Ainsworth, T. D. and Hoegh-Guldberg, O. (2006) Phototrophic microendoliths bloom during coral “white syndrome”. Coral Reefs, 25 4: 577-581.

Intra-colonial response to Acroporid “White syndrome” lesions in tabular Acropora spp. (Scleractinia)
Roff, G., Hoegh-Guldberg, O. and Fine, M. (2006) Intra-colonial response to Acroporid “White syndrome” lesions in tabular Acropora spp. (Scleractinia). Coral Reefs, 25 2: 255-264.

Aerial exposure influences bleaching patterns
Leggat, W, Ainsworth, TD, Dove, S and Hoegh-Guldberg, O (2006) Aerial exposure influences bleaching patterns. Coral Reefs, 25 3: 452-452.

Ecology – Complexities of coral reef recovery
Hoegh-Guldberg, O (2006) Ecology – Complexities of coral reef recovery. Science, 311 5757: 42-43.

Fluorescence in situ hybridization and spectral imaging of coral-associated bacterial communities
Ainsworth, T. D., Fine, M., Blackall, L. L. and Hoegh-Guldberg, O. (2006) Fluorescence in situ hybridization and spectral imaging of coral-associated bacterial communities. Applied And Environmental Microbiology, 72 4: 3016-3020.

Increased mortality and photoinhibition in the symbiotic dinoflagellates of the Indo-Pacific coral Stylophora pistillata (Esper) after summer bleaching
Franklin, D. J., Cedres, C. M. M. and Hoegh-Guldberg, O. (2006) Increased mortality and photoinhibition in the symbiotic dinoflagellates of the Indo-Pacific coral Stylophora pistillata (Esper) after summer bleaching. Marine Biology, 149 3: 633-642.

Monitoring coral bleaching using a colour reference card
Siebeck, U. E., Marshall, N. J., Kluter, A. and Hoegh-Guldberg, O. (2006) Monitoring coral bleaching using a colour reference card. Coral Reefs, 25 3: 453-460.

Physiological and genetic properties of two fluorescent colour morphs of the coral Montipora digitata
Klueter, A., Loh, W., Hoegh-Guldberg, O. and Dove, S. (2006) Physiological and genetic properties of two fluorescent colour morphs of the coral Montipora digitata. Symbiosis, 42 3: 123-134.

Response of holosymbiont pigments from the scleractinian coral Montipora monasteriata to short-term heat stress
Dove, Sophie, Ortiz, Juan Carlos, Enriquez, Susana, Fine, Maoz, Fisher, Paul, Iglesias-Prieto, Roberto, Thornhill, Dan and Hoegh-Guldberg, Ove (2006) Response of holosymbiont pigments from the scleractinian coral Montipora monasteriata to short-term heat stress. Limnology And Oceanography, 51 2: 1149-1158.

Spatial patterns of aerobic and anaerobic mineralization rates and oxygen penetration dynamics in coral reef sediments
Werner, Ursula, Bird, Paul, Wild, Christian, Ferdelman, Timothy, Polerecky, Lubos, Eickert, Gabriele, Jonstone, Ron, Hoegh-Guldberg, Ove and de Beer, Dirk (2006) Spatial patterns of aerobic and anaerobic mineralization rates and oxygen penetration dynamics in coral reef sediments. Marine Ecology-progress Series, 309 March: 93-105.

The evolutionary history of Symbiodinium and scleractinian hosts – Symbiosis, diversity, and the effect of climate change
Stat, Michael, Carter, Dee and Hoegh-Guldberg, Ove (2006) The evolutionary history of Symbiodinium and scleractinian hosts – Symbiosis, diversity, and the effect of climate change. Perspectives In Plant Ecology Evolution And Systematics, 8 1: 23-43.

Viruses: agents of coral disease?
Davy, K., Burchett, G., Dale, L., Davies, R., DAVY, E., Muncke, C., Hoegh-Guldberg, I. O. and WILSON, H. (2006) Viruses: agents of coral disease?. Diseases of Aquatic Organisms, 69 1: 101-110.

Comment on “Coral reef calcification and climate change: The effect of ocean warming”
Kleypas, J. A., Buddemeier, R. W., Eakin, C. M., Gattusso, J. P., Guinotte, J., Hoegh-Guldberg, I. O., Iglesias-Prieto, R., Jokiel, J. P., Langdon, C., Skirving, W. and Strong, A. E. (2005) Comment on “Coral reef calcification and climate change: The effect of ocean warming”. Geophysical Research Letters, 32 8: .

Coral bleaching following wintry weather
Hoegh-Guldberg, O., Fine, M., Skirving, W., Johnstone, R., Dove, S. and Strong, A. (2005) Coral bleaching following wintry weather. Limnology And Oceanography, 50 1: 265-271.

Global assessment of coral bleaching and required rates of adaptation under climate change
Donner, S. D., Skirving, W. J., Little, C. M., Oppenheimer, M. and Hoegh-Guldberg, O. (2005) Global assessment of coral bleaching and required rates of adaptation under climate change. Global Change Biology, 11 12: 2251-2265.

Low coral cover in a high-CO2 world
Hoegh-Guldberg, Ove (2005) Low coral cover in a high-CO2 world. Journal of Geophysical Research-oceans, 110 C9: C09S06.

The effect of temperature on the size and population density of dinoflagellates in larvae of the reef coral Porites astreoides
Edmunds, P. J., Gates, R. D., Leggat, W., Hoegh-Guldberg, O. and Allen-Requa, L. (2005) The effect of temperature on the size and population density of dinoflagellates in larvae of the reef coral Porites astreoides. Invertebrate Biology, 124 3: 185-193.

Tolerance of endolithic algae to elevated temperature and light in the coral Montipora monasteriata from the southern Great Barrier Reef
Fine, M., Meroz-Fine, E. and Hoegh-Guldberg, O. (2005) Tolerance of endolithic algae to elevated temperature and light in the coral Montipora monasteriata from the southern Great Barrier Reef. Journal of Experimental Biology, 208 1: 75-81.

Dynamics of a temperature-related coral disease outbreak
Jones, R. J., Bowyer, J. C., Hoegh-Guldberg, I.O. and Blackall, L. L. (2004) Dynamics of a temperature-related coral disease outbreak. Marine Ecology Progress Series, 281 63-77.

Cell death and degeneration in the symbiotic dinoflagellates of the coral Stylophora pistillata during bleaching
Franklin, D. J., Hoegh-Guldberg, O., Jones, R. J. and Berges, J. A. (2004) Cell death and degeneration in the symbiotic dinoflagellates of the coral Stylophora pistillata during bleaching. Marine Ecology-progress Series, 272 117-130.

Closely related Symbiodinium spp. differ in relative dominance in coral reef host communities across environmental, latitudinal and biogeographic gradients
LaJeunesse, T. C., Bhagooli, R., Hidaka, M., DeVantier, L., Done, T., Schmidt, G. W., Fitt, W. K. and Hoegh-Guldberg, O (2004) Closely related Symbiodinium spp. differ in relative dominance in coral reef host communities across environmental, latitudinal and biogeographic gradients. Marine Ecology-progress Series, 284 147-161.

Coral reefs in a century of rapid environmental change
Hoegh-Guldberg, O. (2004) Coral reefs in a century of rapid environmental change. Symbiosis, 37 1: 1-31.

Low temperatures cause coral bleaching
Hoegh-Guldberg, I.O. and Fine, M. (2004) Low temperatures cause coral bleaching. Coral Reefs, 23 3: 444-444.

Nutrient-induced perturbations to delta C-13 and delta N-15 in symbiotic dinoilagellates and their coral hosts
Hoegh-Guldberg, Ove, Muscatine, Leonard, Goiran, Claire, Siggaard, Dorthe and Marion, Guy (2004) Nutrient-induced perturbations to delta C-13 and delta N-15 in symbiotic dinoilagellates and their coral hosts. Marine Ecology Progress Series, 280 105-114.

Causes of coral reef degradation
Pandolfi, J. M., Bradbury, R. H., Sala, E., Hughes, T. P., Bjorndal, K. A., Cooke, R. G., McArdle, D., McClenachan, L., Newman, M. J. H., Paredes, G., Warner, R. R., Jackson, J. B. C., Hughes, T. P., Baird, A. H., Bellwood, D. R., Connolly, S. R., Folke, C., Grosberg, R., Hoegh-Guldberg, O. and et al. (2003) Causes of coral reef degradation. Science, 302 5650: 1502-1504.

Causes of coral reef degradation – Response
Hughes, TP, Baird, AH, Bellwood, DR, Connolly, SR, Folke, C, Grosberg, R, Hoegh-Guldberg, O, Jackson, JBC, Kleypas, J, Lough, JM, Marshall, P, Nystrom, M, Palumbi, SR, Pandolfi, JM, Rosen, B and Roughgarden, J (2003) Causes of coral reef degradation – Response. Science, 302 5650: 1503-1504.

Low symbiont diversity in southern Great Barrier Reef corals, relative to those of the Caribbean
LaJeunesse, Todd C., Loh, William K. W., van Woesik, Robert, Hoegh-Guldberg, Ove, Schmidt, Gregory W. and Fitt, William K. (2003) Low symbiont diversity in southern Great Barrier Reef corals, relative to those of the Caribbean. Limnology And Oceanography, 48 5: 2046-2054.

Symbiont diversity within the widespread Scleractinian coral Plesiastrea versipore across the northwestern Pacific
Rodriguez-Lannetty, M. and Hoegh-Guldberg, I. O. (2003) Symbiont diversity within the widespread Scleractinian coral Plesiastrea versipore across the northwestern Pacific. Marine Biology, 143 3: 501-509.

Deconvolving the delta O-18 seawater component from subseasonal coral delta O-18 and Sr/Ca at Rarotonga in the southwestern subtropical Pacific for the period 1726 to 1997
Ren, Lei, Linsley, Braddock K., Wellington, Gerard M., Schrag, Daniel P. and Hoegh-Guldberg, Ove (2003) Deconvolving the delta O-18 seawater component from subseasonal coral delta O-18 and Sr/Ca at Rarotonga in the southwestern subtropical Pacific for the period 1726 to 1997. Geochimica Et Cosmochimica Acta, 67 9: 1609-1621.

The 2.2 A crystal structure of a pocilloporin pigment reveals a nonplanar chromophore conformation
Prescott, M., Ling, M., Beddoe, T., Oakley, A. J., Dove, S., Hoegh-Guldberg, O., Devenish, R. J. and Rossjohn, J. (2003) The 2.2 A crystal structure of a pocilloporin pigment reveals a nonplanar chromophore conformation. Structure, 11 3: 275-284.

The production, purification and crystallization of a pocilloporin pigment from a reef-forming coral
Beddoe, T., Ling, M., Dove, S., Hoegh-Guldberg, O., Devenish, R. J., Prescott, M. and Rossjohn, J. (2003) The production, purification and crystallization of a pocilloporin pigment from a reef-forming coral. Acta Crystallographica Section D-biological Crystallography, 59 3: 597-599.

Climate change, human impacts, and the resilience of coral reefs
Hughes, T. E., Baird, A. H., Bellwood, D. R., Card, M., Connolly, S. R., Folke, C., Grosberg, R., Hoegh-Guldberg, I. O., Jackson, J.R., Kleypas, J, Lough, J. M., Marshall, P., Nystrom, M., Palumbi, S. R., Pandolfi, J. M., Rosen, B. and Roughgarden, J. (2003) Climate change, human impacts, and the resilience of coral reefs. Science, 301 5635: 929-933.

Genetic variation of the scleractinian coral Stylophora pistillata, from western Pacific reefs
Takabayashi, M., Carter, D., Lopez, J. and Hoegh-Guldberg, O. (2003) Genetic variation of the scleractinian coral Stylophora pistillata, from western Pacific reefs. Coral Reefs, 22 1: 17-22.

Highly organized structure in the non-coding region of the psbA minicircle from clade C Symbiodinium
Moore, Robert, Ferguson, Katherine, Loh, William, Hoegh-Guldberg, Ove and Carter, Dee (2003) Highly organized structure in the non-coding region of the psbA minicircle from clade C Symbiodinium. International Journal of Systematic And Evolutionary Microbiology, 53 6: 1725-1734.

Kinetics of photoacclimation in corals
Anthony, KRN and Hoegh-Guldberg, O (2003) Kinetics of photoacclimation in corals. Oecologia, 134 1: 23-31.

Photosynthetic responses of the coral Montipora digitata to cold temperature stress
Saxby, T., Dennison, W. C. and Hoegh-Guldberg, O. (2003) Photosynthetic responses of the coral Montipora digitata to cold temperature stress. Marine Ecology-progress Series, 248 85-97.

Reef is in danger
Hoegh-Guldberg, O, Furnas, M, Williams, DM, Wilkinson, C and Marshall, P (2003) Reef is in danger. New Scientist, 177 2380: 24-24.

Variation in Coral Photosynthesis, Respiration and Growth Characteristics in Contrasting Light Microhabitats: An Analogue to Plants in Forest Gaps and Understoreys?
Anthony, K. R. N. and Hoegh-Guldberg, O. (2003) Variation in Coral Photosynthesis, Respiration and Growth Characteristics in Contrasting Light Microhabitats: An Analogue to Plants in Forest Gaps and Understoreys?. Functional Ecology, 17 2: 246-259.

Ecological responses to recent climate change
Walther, Gian-Reto, Post, Eric, Convey, Peter, Menzel, Annette, Parmesan, Camille, Beebee, Trevor J. C., Fromentin, Jean-Marc, Hoegh-Guldberg, Ove and Bairlein, Franz (2002) Ecological responses to recent climate change. Nature, 416 6879: 389-395.

Ecology – Is coral bleaching really adaptive?
Hoegh-Guldberg, Ove, Jones, Ross J., Ward, Selina and Loh, William K. (2002) Ecology – Is coral bleaching really adaptive?. Nature, 415 6872: 601-602.

Deconvolving the d180 seawater component from the subseasonal coral d180 Sr/Ca at Rarotonga in the Southwestern subtropical Pacific for the period of 1726 to 1997
Lei, R., Lindsay, B., Wellington, G. M., Shrag, D. and Hoegh-Guldberg, I.O. (2002) Deconvolving the d180 seawater component from the subseasonal coral d180 Sr/Ca at Rarotonga in the Southwestern subtropical Pacific for the period of 1726 to 1997. Geochemica Et Cosmochimica Acta, 67 9: 1609-1621-1621.

The phylogeography and connectivity of the latitudinally widespread scleractinian coral Plesiastrea versipora in the Western Pacific
Rodriguez-Lanetty, M. and Hoegh-Guldberg, O. (2002) The phylogeography and connectivity of the latitudinally widespread scleractinian coral Plesiastrea versipora in the Western Pacific. Molecular Ecology, 11 7: 1177-1189.

A test of the ash-free dry weight technique on the developmental stages of Patiriella spp. (Echinodermata : Asteroidea)
Moreno, G., Selvakumaraswamy, P., Byrne, M. and Hoegh-Guldberg, O. (2001) A test of the ash-free dry weight technique on the developmental stages of Patiriella spp. (Echinodermata : Asteroidea). Limnology And Oceanography, 46 5: 1214-1220.

Diurnal changes in the photochemical efficiency of the symbiotic dinoflagellates (Dinophyceae) of corals: photoprotection, photoinactivation and the relationship to coral bleaching
Jones, R. J. and Hoegh-Guldberg, I. O. (2001) Diurnal changes in the photochemical efficiency of the symbiotic dinoflagellates (Dinophyceae) of corals: photoprotection, photoinactivation and the relationship to coral bleaching. Plant, Cell & Environment, 24 1: 89-99.

ENCORE: The effect of nutrient enrichment on coral reefs. Synthesis of results and conclusions
Koop, K., Booth, D., Broadbent, A., Brodie, J., Bucher, D., Capone, D., Coll, J., Dennison, W. C., Erdmann, M., Harrison, P., Hoegh-Guldberg, I. O., Hutchings, P., Jones, G. B., Larkum, A. W. D. and O’Neil, J. M. (2001) ENCORE: The effect of nutrient enrichment on coral reefs. Synthesis of results and conclusions. Marine Pollution Bulletin: the international journal for marine environmentalists, scientists, engineers, administrators, politicians and lawyers, 42 2: 91-120.

Genetic variability of the symbiotic dinoflagellates from the wide ranging coral species Seriatopora hystrix and Acropora longicyathus in the Indo-West Pacific
Loh, W. K. W., Loi, T., Carter, D. and Hoegh-Guldberg, O. (2001) Genetic variability of the symbiotic dinoflagellates from the wide ranging coral species Seriatopora hystrix and Acropora longicyathus in the Indo-West Pacific. Marine Ecology-progress Series, 222 97-107.

Global Climate change and the thermal tolerance of corals
Hoegh-Guldberg, I.O. (2001) Global Climate change and the thermal tolerance of corals. Galaxea, 2 1-11.

Latitudinal variability in symbiont specificity within the widespread scleractinian coral Plesiastrea versipora
Rodriguez, M., Loh, W. K. W., Carter, D. and Hoegh-Guldberg, I. O. (2001) Latitudinal variability in symbiont specificity within the widespread scleractinian coral Plesiastrea versipora. Marine Biology, 138 6: 1175-1181.

Major colour patterns of reef-building corals are due to a family of GFP-like proteins
Dove, S. G., Hoegh-Guldberg, O. and Ranganathan, S. (2001) Major colour patterns of reef-building corals are due to a family of GFP-like proteins. Coral Reefs, 19 3: 197-204.

Panmixia in Pocillopora verrucosa from South Africa
Ridgway, T., Hoegh-Guldberg, O. and Ayre, D. J. (2001) Panmixia in Pocillopora verrucosa from South Africa. Marine Biology, 139 1: 175-181.

Response of a scleractinian coral, Stylophora pistillata, to iron and nitrate enrichment
Ferrier-Pages, C., Schoelzke, V., Jaubert, J., Muscatine, L. and Hoegh-Guldberg, O. (2001) Response of a scleractinian coral, Stylophora pistillata, to iron and nitrate enrichment. Journal of Experimental Marine Biology And Ecology, 259 2: 249-261.

Changes in quantum efficiency of Photosystem II of symbiotic dinoflagellates of corals after heat stress, and of bleached corals sampled after the 1998 Great Barrier Reef mass bleaching event Ross J. Jones , Selina Ward, Affendi Yang Amri and Ove Hoegh-Guldberg
Jones, R. J., Ward, S., Yang Amri, A. and Hoegh-Guldberg, I.O. (2000) Changes in quantum efficiency of Photosystem II of symbiotic dinoflagellates of corals after heat stress, and of bleached corals sampled after the 1998 Great Barrier Reef mass bleaching event Ross J. Jones , Selina Ward, Affendi Yang Amri and Ove Hoegh-Guldberg. Marine and Freshwater Research, 51 1: 63-71.

Fluorescent pigments in corals are photoprotective
Salih, A., Larkum, A., Cox, G., Kuhl, M. and Hoegh-Guldberg, O. (2000) Fluorescent pigments in corals are photoprotective. Nature, 408 6814: 850-853.

Influence of field-based nutrient enrichment on the photobiology of the giant clam Tridacna maxima
Ambariyanto and Hoegh-Guldberg, O (1999) Influence of field-based nutrient enrichment on the photobiology of the giant clam Tridacna maxima. Marine Biology, 133 4: 659-664.

Net uptake of dissolved free amino acids by the giant clam, Tridacna maxima: alternative sources of energy and nitrogen?
Ambariyanto and Hoegh-Guldberg, O. (1999) Net uptake of dissolved free amino acids by the giant clam, Tridacna maxima: alternative sources of energy and nitrogen?. Coral Reefs, 18 1: 91-96.

The energetics of development of three congeneric seastars (Patiriella Verrill, 1913) with different types of development
Moreno, Guillermo and Hoegh-Guldberg, Ove (1999) The energetics of development of three congeneric seastars (Patiriella Verrill, 1913) with different types of development. Journal of Experimental Marine Biology And Ecology, 235 1: 1-20.

Availability of two forms of dissolved nitrogen to the coral Pocillopora damicornis and its symbiotic zooxanthellae
Hoegh-Guldberg, O and Williamson, J (1999) Availability of two forms of dissolved nitrogen to the coral Pocillopora damicornis and its symbiotic zooxanthellae. Marine Biology, 133 3: 561-570.

Climate change, coral bleaching and the future of the world’s coral reefs
Hoegh-Guldberg, O (1999) Climate change, coral bleaching and the future of the world’s coral reefs. Marine And Freshwater Research, 50 8: 839-866.

Effects of cyanide on coral photosynthesis: implications for identifying the cause of coral bleaching and for assessing the environmental effects of cyanide fishing
Jones, Ross J. and Hoegh-Guldberg, Ove (1999) Effects of cyanide on coral photosynthesis: implications for identifying the cause of coral bleaching and for assessing the environmental effects of cyanide fishing. Marine Ecology-progress Series, 177 83-91.

PAM chlorophyll fluorometry: a new in situ technique for stress assessment in scleractinian corals, used to examine the effects of cyanide from cyanide fishing
Jones, RJ, Kildea, T and Hoegh-Guldberg, O (1999) PAM chlorophyll fluorometry: a new in situ technique for stress assessment in scleractinian corals, used to examine the effects of cyanide from cyanide fishing. Marine Pollution Bulletin, 38 10: 864-874.

Photoinhibition and photoprotection in symbiotic dinoflagellates from reef-building corals
Hoegh-Guldberg, O and Jones, RJ (1999) Photoinhibition and photoprotection in symbiotic dinoflagellates from reef-building corals. Marine Ecology-progress Series, 183 73-86.

Sweeper polyps of the coral Goniopora tenuidens (Scleractinia : Poritidae)
Peach, Meredith B. and Hoegh-Guldberg, Ove (1999) Sweeper polyps of the coral Goniopora tenuidens (Scleractinia : Poritidae). Invertebrate Biology, 118 1: 1-7.

Temperature-induced bleaching of corals begins with impairment of the CO2 fixation mechanism in zooxanthellae
Jones, R. J., Hoegh-Guldberg, O., Larkum, A. W. D. and Schreiber, U. (1998) Temperature-induced bleaching of corals begins with impairment of the CO2 fixation mechanism in zooxanthellae. Plant Cell And Environment, 21 12: 1219-1230.

Amino acid synthesis in the symbiotic sea anemone Aiptasia pulchella
Swanson, R. and Hoegh-Guldberg, O. (1998) Amino acid synthesis in the symbiotic sea anemone Aiptasia pulchella. Marine Biology, 131 1: 83-93.

A coral-specific primer for PCR amplification of the internal transcribed spacer region in ribosomal DNA
Takabayashi, M, Carter, DA, Loh, WKW and Hoegh-Guldberg, O (1998) A coral-specific primer for PCR amplification of the internal transcribed spacer region in ribosomal DNA. Molecular Ecology, 7 7: 928-930.

Effect of nutrient enrichment in the field on the biomass, growth and calcification of the giant clam Tridacna maxima
Ambariyanto and HoeghGuldberg, O (1997) Effect of nutrient enrichment in the field on the biomass, growth and calcification of the giant clam Tridacna maxima. Marine Biology, 129 4: 635-642.

Size at sexual maturity and the reproductive biology of two species of scyllarid lobster from New South Wales and Victoria, Australia
Stewart, J, Kennelly, SJ and HoeghGuldberg, O (1997) Size at sexual maturity and the reproductive biology of two species of scyllarid lobster from New South Wales and Victoria, Australia. Crustaceana, 70 344-367.

Effects of egg size on postlarval performance: Experimental evidence from a sea urchin
Emlet, RB and HoeghGuldberg, O (1997) Effects of egg size on postlarval performance: Experimental evidence from a sea urchin. Evolution, 51 1: 141-152.

Energy use during the development of a lecithotrophic and a planktotrophic echinoid
HoeghGuldberg, O and Emlet, RB (1997) Energy use during the development of a lecithotrophic and a planktotrophic echinoid. Biological Bulletin, 192 1: 27-40.

Sources of energy for increased metabolic demand during metamorphosis of the abalone Haliotis rufescens (Mollusca) (vol 191, pg 402, 1996)
Shilling, FM, HoeghGuldberg, O and Manahan, DT (1997) Sources of energy for increased metabolic demand during metamorphosis of the abalone Haliotis rufescens (Mollusca) (vol 191, pg 402, 1996). Biological Bulletin, 192 1: R4-R4.

Development of the hyaline layer around the planktonic embryos and larvae of the asteroid Patiriella calcar and the presence of associated bacteria
Cerra, A, Byrne, M and HoeghGuldberg, O (1997) Development of the hyaline layer around the planktonic embryos and larvae of the asteroid Patiriella calcar and the presence of associated bacteria. Invertebrate Reproduction & Development, 31 1-3: 337-343.

Sources of energy for increased metabolic demand during metamorphosis of the abalone Haliotis rufescens (Mollusca)
Shilling, FM, HoeghGuldberg, O and Manahan, DT (1996) Sources of energy for increased metabolic demand during metamorphosis of the abalone Haliotis rufescens (Mollusca). Biological Bulletin, 191 3: 402-412.

Nutrient enrichment and the ultrastructure of zooxanthellae from the giant clam Tridacna maxima
Ambariyanto and HoeghGuldberg, O (1996) Nutrient enrichment and the ultrastructure of zooxanthellae from the giant clam Tridacna maxima. Marine Biology, 125 2: 359-363.

Isolation and partial characterisation of the pink and blue pigments of Pocilloporid and Acroporid corals
Dove, SG, Takabayashi, M and HoeghGuldberg, O (1995) Isolation and partial characterisation of the pink and blue pigments of Pocilloporid and Acroporid corals. Biological Bulletin, 189 3: 288-297.

Ecological and Physiological Differences Between 2 Color Morphs of the Coral Pocillopora-Damicornis
Takabayashi, M and Hoeghguldberg, O (1995) Ecological and Physiological Differences Between 2 Color Morphs of the Coral Pocillopora-Damicornis. Marine Biology, 123 4: 705-714.

Temperature, Food Availability, and the Development of Marine Invertebrate Larvae
Hoeghguldberg, O and Pearse, JS (1995) Temperature, Food Availability, and the Development of Marine Invertebrate Larvae. American Zoologist, 35 4: 415-425.

Free Amino-Acids Exhibit Anthozoan Host Factor Activity – They Induce the Release of Photosynthate From Symbiotic Dinoflagellates In-Vitro
Gates, RD, Hoeghguldberg, O, McFallngai, MJ, Bil, KY and Muscatine, L (1995) Free Amino-Acids Exhibit Anthozoan Host Factor Activity – They Induce the Release of Photosynthate From Symbiotic Dinoflagellates In-Vitro. Proceedings of the National Academy of Sciences of the United States of America, 92 16: 7430-7434.

An Optimal Strategy for Sampling Oocytes in Female Balmain Bugs Ibacus-Peronii Leach (Decapoda, Scyllaridae)
Stewart, J, Kennelly, SJ and Hoeghguldberg, O (1995) An Optimal Strategy for Sampling Oocytes in Female Balmain Bugs Ibacus-Peronii Leach (Decapoda, Scyllaridae). Invertebrate Reproduction & Development, 28 1: 7-11.

Periodic Mass-Bleaching and Elevated Sea Temperatures – Bleaching of Outer Reef Slope Communities in Moorea, French-Polynesia
Hoeghguldberg, O and Salvat, B (1995) Periodic Mass-Bleaching and Elevated Sea Temperatures – Bleaching of Outer Reef Slope Communities in Moorea, French-Polynesia. Marine Ecology Progress Series, 121 1-3: 181-190.

Coulometric Measurement of Oxygen-Consumption During Development of Marine Invertebrate Embryos and Larvae
Hoeghguldberg, O and Manahan, DT (1995) Coulometric Measurement of Oxygen-Consumption During Development of Marine Invertebrate Embryos and Larvae. Journal of Experimental Biology, 198 1: 19-30.

Reproductive-Cycle of Centrostephanus-Rodgersii (Echinoidea), with Recommendations for the Establishment of a Sea-Urchin Fishery in New-South-Wales
King, CK, Hoeghguldberg, O and Byrne, M (1994) Reproductive-Cycle of Centrostephanus-Rodgersii (Echinoidea), with Recommendations for the Establishment of a Sea-Urchin Fishery in New-South-Wales. Marine Biology, 120 1: 95-106.

Uptake of Dissolved Organic-Matter by Larval Stage of the Crown-of-Thorns Starfish Acanthaster Planci
Hoeghguldberg, O (1994) Uptake of Dissolved Organic-Matter by Larval Stage of the Crown-of-Thorns Starfish Acanthaster Planci. Marine Biology, 120 1: 55-63.

Host-Zooxanthella Interactions in 4 Temperate Marine Invertebrate Symbioses – Assessment of Effect of Host Extracts On Symbionts
Sutton, DC and Hoeghguldberg, O (1990) Host-Zooxanthella Interactions in 4 Temperate Marine Invertebrate Symbioses – Assessment of Effect of Host Extracts On Symbionts. Biological Bulletin, 178 2: 175-186.

Influence of the Population-Density of Zooxanthellae and Supply of Ammonium On the Biomass and Metabolic Characteristics of the Reef Corals Seriatopora-Hystrix and Stylophora-Pistillata
Hoeghguldberg, O and Smith, GJ (1989) Influence of the Population-Density of Zooxanthellae and Supply of Ammonium On the Biomass and Metabolic Characteristics of the Reef Corals Seriatopora-Hystrix and Stylophora-Pistillata. Marine Ecology Progress Series, 57 2: 173-186.

The Effect of Sudden Changes in Temperature, Light and Salinity On the Population-Density and Export of Zooxanthellae From the Reef Corals Stylophora-Pistillata Esper and Seriatopora-Hystrix Dana
Hoeghguldberg, O and Smith, GJ (1989) The Effect of Sudden Changes in Temperature, Light and Salinity On the Population-Density and Export of Zooxanthellae From the Reef Corals Stylophora-Pistillata Esper and Seriatopora-Hystrix Dana. Journal of Experimental Marine Biology and Ecology, 129 3: 279-303.

A Method for Determining the Surface-Area of Corals
Hoeghguldberg, O (1988) A Method for Determining the Surface-Area of Corals. Coral Reefs, 7 3: 113-116.

Expulsion of Zooxanthellae by Symbiotic Cnidarians From the Red-Sea
Hoeghguldberg, O, McCloskey, LR and Muscatine, L (1987) Expulsion of Zooxanthellae by Symbiotic Cnidarians From the Red-Sea. Coral Reefs, 5 4: 201-204.

Studies On a Nudibranch That Contains Zooxanthellae .1. Photosynthesis, Respiration and the Translocation of Newly Fixed Carbon by Zooxanthellae in Pteraeolidia-Ianthina
Hoeghguldberg, O and Hinde, R (1986) Studies On a Nudibranch That Contains Zooxanthellae .1. Photosynthesis, Respiration and the Translocation of Newly Fixed Carbon by Zooxanthellae in Pteraeolidia-Ianthina. Proceedings of the Royal Society B-Biological Sciences, 228 1253: 493-509.

Studies On a Nudibranch That Contains Zooxanthellae .2. Contribution of Zooxanthellae to Animal Respiration (Czar) in Pteraeolidia-Ianthina with High and Low-Densities of Zooxanthellae
Hoeghguldberg, O, Hinde, R and Muscatine, L (1986) Studies On a Nudibranch That Contains Zooxanthellae .2. Contribution of Zooxanthellae to Animal Respiration (Czar) in Pteraeolidia-Ianthina with High and Low-Densities of Zooxanthellae. Proceedings of the Royal Society B-Biological Sciences, 228 1253: 511-521.

A Brood-Protecting Nudibranch with Pelagic Lecithotrophic Development
Rose, RA and Hoeghguldberg, IO (1982) A Brood-Protecting Nudibranch with Pelagic Lecithotrophic Development. Journal of Molluscan Studies, 48 AUG: 231-232.

Conference Publication

Differential Regulation of Heat Shock Proteins and Cytochrome P450 Genes in Symbiotic Dinoflagellates Under Thermal Stress
Rosic, Nela, Pernice, Mathieu, Hoegh-Guldberg, Ove and Dove, Sophie (2011). Differential Regulation of Heat Shock Proteins and Cytochrome P450 Genes in Symbiotic Dinoflagellates Under Thermal Stress. In: Fifth European Phycological Congress: EPC5 Programme and Abstracts. 5th European Phycological Congress, Rhodes, Greece, (145-145). 04-09 September 2011.

Transcriptomics of the coral-algal symbiosis in response to environmental stress
Rosic, Nela, Kaniewska, Pauline, Ling, Edmund, Edwards, David, Dove, Sophie and Hoegh-Guldberg, Ove (2011). Transcriptomics of the coral-algal symbiosis in response to environmental stress. In: Fifth European Phycological Congress: EPC5 Programme and Abstracts. 5th European Phycological Congress, Rhodes, Greece, (97-97). 04-09 September 2011.

Good practice guidance paper on detection and attribution related to anthropogenic climate change
Hegerl, Gabriele C., Hoegh-Guldberg, Ove, Casassa, Gino, Hoerling, Martin, Kovats, Sari, Parmesan, Camille, Pierce, David and Stott, Peter (2010). Good practice guidance paper on detection and attribution related to anthropogenic climate change. In: Thomas Stocker, Christopher Field, Qin Dahe, Vincente Barros, Gian-Kasper Plattner, Melinda Tignor, Pauline Midgley and Kristie Ebi, IPCC Expert Meeting on Detection and Attribution Related to Anthropogenic Climate Change. Meeting Report. IPCC Expert Meeting on Detection and Attribution Related to Anthropogenic Climate Change 2010, Geneva, Switzerland, (1-8). 14-16 September, 2009.

The coral proto free ocean carbon enrichment system (CP-FOCE): Engineering and development
Marker, Malcolm, Kline, D.I., Kirkwood, W.J., Headley, K., Brewer, P.G., Peltzer, E.T., Miard, T., Chai, A., James, M., Schneider, K., Silverman, J., Caldeiara, K., Koseff, J.R., Monismith, S., Opdyke, B., Dunbar, R., White, R., Dove, S. and Hoegh-Guldberg, O. (2010). The coral proto free ocean carbon enrichment system (CP-FOCE): Engineering and development. In: Proceedings of OCEANS 2010 IEEE. OCEANS 2010 IEEE – Sydney, Sydney, Australia, (1-10). 24-27 May 2010.

Symbiodinium diversity on the Great Barrier Reef
Sampayo, E.M., Tonk, L., Baird, A.H., van Oppen, M.J.H. and Hoegh-Guldberg, O. (2009). Symbiodinium diversity on the Great Barrier Reef. In: Suzanne Long and Robin Taylor, Proceedings of the 2008 Marine and Tropical Sciences Research Facility Annual Conference. 2008 Marine and Tropical Sciences Research Facility Annual Conference: MTSRF Theme 5 – Enhancing Delivery, Cairns, Australia, (81-87). 28 April – 1 May 2008.

Nitrogen isotopes (delta N-15) in coral skeleton: Assessing provenance in the great barrier reef lagoon
Marion, G. S., Hoegh-Guldberg, O. and McCulloch, M. T. (2006). Nitrogen isotopes (delta N-15) in coral skeleton: Assessing provenance in the great barrier reef lagoon. In: Geochimica Et Cosmochimica Acta. 16th Annual V M Goldschmidt Conference, Melbourne Australia, (A392-A392). Aug-Sep -, 2006.

Thermal biology of coral reefs: will coral reefs survive global warming?
Hoegh-Guldberg, O. (2006). Thermal biology of coral reefs: will coral reefs survive global warming?. In: Comparative Biochemistry and Physiology A-Molecular & Integrative Physiology. , , (S131-S131). .

HF ocean surface radar monitoring for coral bleaching in the great barrier reef
Heron, M. L., Willis, B., Prytz, A., Cetina-Heredia, P., Mao, Y., Hoegh-Guldberg, O., Skirving, W. J., Heron, S. F., Eakin, C. M. and Steinberg, C. R. (2006). HF ocean surface radar monitoring for coral bleaching in the great barrier reef. In: Oceans 2006, Vols 1-4. Oceans 2006 Conference, Boston Ma, (1614-1618). Sep 18-22, 2006.

Coral reefs and projections of future change
Hoegh-Guldberg, O (2004). Coral reefs and projections of future change. In: Coral Health and Disease. International Meeting on Coral Health and Disease, Elat Israel, (463-484). Apr, 2003.

Coral health monitoring using colour charts: A new tool for research and monitoring groups, schools and tourists
Siebeck, U., Marshall, J. and Hoegh-Guldberg, I.O. (2003). Coral health monitoring using colour charts: A new tool for research and monitoring groups, schools and tourists. In: J. N. A. Hooper, N. Hall and B. M. Degnan, Proceedings of the 2003 meeting of the Australian Marine Science Association (AMSA). AMSA Annual Conference, Brisbane, (148-148). 9-11 July 2003.

Coral bleaching reduces reproduction of scleractinian corals and increases susceptibility to future stress
Ward, S., Harrison, P. and Hoegh-Guldberg, O. (2002). Coral bleaching reduces reproduction of scleractinian corals and increases susceptibility to future stress. In: M. K. Moosa, S. Soemodihardjo, A. Soegiarto, K. Romimohtarto, A. Nontji, Soekarno and Suharsono, Proceedings of the Ninth International Coral Reef Symposium, 2000. 9th International Coral Reef Symposium, Bali, Indonesia, (1123-1129). 23-27 October 2000.

An easy, cheap reliable method of monitoring coral bleaching
Marshall, J., Hoegh-Guldberg, I.O. and Kluter, A. (2001). An easy, cheap reliable method of monitoring coral bleaching. In: Australian Coral Reef Society Committee, 2001 Annual ACRS Conference: Coral Reefs in the 21st Century. 2001 Annual ACRS Conference, Townsville, Australia, (33-33). 6 – 8 July 2001.

Sizing the impact: Coral reef ecosystems as early casualties of climate change
Hoegh-Guldberg, O (2001). Sizing the impact: Coral reef ecosystems as early casualties of climate change. In: Fingerprints of Climate Change. International Conference on Fingerprints of Climate Change, Ascona Switzerland, (203-228). Feb 23-25, 2001.

The molecular ecology of colour in reef-building corals
Dove, S. G. and Hoegh-Guldberg, I.O. (2001). The molecular ecology of colour in reef-building corals. In: Australian Coral Reef Society, Magnetic Island International Hotel, Queensland, (). 6-9th July.

Global climate change and the tolerance of corals to changes in sea temperatures: Implications for reefs in the 21st Century
Hoegh-Guldberg, Ian O. (2000). Global climate change and the tolerance of corals to changes in sea temperatures: Implications for reefs in the 21st Century. In: Proceedings of JAMSTEC International Coral Reef Symposium : Coral reef biodiversity and health as indicators of environmental change. JAMSTEC International Coral Reef Symposium, Tokyo, Japan, (197-214). 23-24 February 2000.

Inter- and intra-specific variability in DNA sequence in the ITS region of corals
Takabayashi, Misaki, Carter, Dee, Ward, Selina and Hoegh-Guldberg, Ove (1998). Inter- and intra-specific variability in DNA sequence in the ITS region of corals. In: Proceedings of the 75th Conference of the Australian Coral Reef Society. 75th Conference of the Australian Coral Reef Society, Heron Island, QLD, Australia, (237-244). 2-6 October 1997.

Dissolved free amino acid (DFAA) concentrations in Great Barrier Reef waters: the implications for the role of DFAA transport by Acanthaster planci.
Dove, Sophie G., Hoegh-Guldberg, Ove and Siggaard, Dorthe (1997). Dissolved free amino acid (DFAA) concentrations in Great Barrier Reef waters: the implications for the role of DFAA transport by Acanthaster planci.. In: Proceedings of the Eight International Coral Reef Symposium. Eight International Coral Reef Symposium, Panama City, (1237-1241). 24-29 June 1996.

The Annual Reproductive Cycle of the Sea Urchin Centrostephanus-Rodgersii in New-South-Wales
King, CK, Hoeghguldberg, O and Byrne, M (1994). The Annual Reproductive Cycle of the Sea Urchin Centrostephanus-Rodgersii in New-South-Wales. In: Echinoderms Through Time. 8th International Echinoderm Conference, Dijon France, (734-734). Sep 06-10, 1993.

Metabolic Requirements During Growth and Development of Echinoderm Larvae
Hoeghguldberg, O and Manahan, DT (1991). Metabolic Requirements During Growth and Development of Echinoderm Larvae. In: American Zoologist. , , (A4-A4). .

Long-Term Measurements of Metabolic Rates of Molluscan Larvae by Coulometric Respirometry
Hoeghguldberg, Q and Manahan, DT (1989). Long-Term Measurements of Metabolic Rates of Molluscan Larvae by Coulometric Respirometry. In: American Zoologist. unknown, unknown, (A60-A60). unknown.

Meeting the Cost of Metamorphosis
Shilling, FM, Hoeghguldberg, O and Manahan, DT (1989). Meeting the Cost of Metamorphosis. In: American Zoologist. , , (A59-A59). .

Light and Feeding Influence Temperature Related Expulsion of Zooxanthellae by the Sea-Anemone Aiptasia-Pulchella
Hoeghguldberg, O (1988). Light and Feeding Influence Temperature Related Expulsion of Zooxanthellae by the Sea-Anemone Aiptasia-Pulchella. In: American Zoologist. , , (A191-A191). .

Density of Zooxanthellae in a Nudibranch – Effect On Zooxanthellae Carbon Budgets
Hoeghguldberg, O (1985). Density of Zooxanthellae in a Nudibranch – Effect On Zooxanthellae Carbon Budgets. In: American Zoologist. , , (A56-A56). .

Other Outputs

Delivering a competitive Australian power system Part 3: a better way to competitive power in 2035
Foster, John, Froome, Craig, Greig, Chris, Hoegh- Guldberg, Ove, Meredith, Paul, Molyneaux, Lynette, Saha, Tapan, Wagner, Liam and Ball, Barry (2013) Delivering a competitive Australian power system Part 3: a better way to competitive power in 2035 St Lucia, QLD, Australia: The University of Queensland, Global Change Institute

Delivering a competitive Australian power system Part 2: the challenges, the scenarios
Foster, John, Froome, Craig, Greig, Chris, Hoegh- Guldberg, Ove, Paul, Meredith, Molyneaux, Lynette, Saha, Tapan, Wagner, Liam and Ball, Barry (2013) Delivering a competitive Australian power system Part 2: the challenges, the scenarios St Lucia, QLD, Australia: The University of Queensland, Global Change Institute

Global Reef Record
Gonzalez Rivero, Manuel and Hoegh-Guldberg, Ian Ove (2013): Global Reef Record. The University of Queensland. Dataset.

Delivering a competitive Australian power system Part 1: Australia’s Global Position
Ball, Barry, Ehmann, Bertram, Foster, John, Froome, Craig, Hoegh-Guldberg, Ove, Meredith, Paul, Molyneaux, Lynette, Saha, Tapan and Wagner, Liam (2011) Delivering a competitive Australian power system Part 1: Australia’s Global Position St Lucia, QLD, Australia: The University of Queensland, Global Change Institute

Cell Visualising characteristic modifying sequences
Jones, E. L., Karan, M., Brugliera, F., Mason, J., Dove, S. G., Hoegh-Guldberg, I.O. and Prescott, M. (2002). Cell Visualising characteristic modifying sequences. PCT/GB02/00928 & WO 02/070703 A2.

Pigment Protein From Coral Tissue
Dove, S. and Hoegh-Guldberg, O . (2000). Pigment Protein From Coral Tissue. WO/2000/046233.

Categories
People Uncategorised

Dr Sophie Dove

Associate Professor

School of Biological SciencesSophie

Faculty of Science

Affiliate Associate Professor
Global Change Institute
Email: sophie@uq.edu.au
Phone: +61 7 336 57229

Overview

Photobiology of isolated reefs and their ability to withstand a range of future climate scenarios

1) Photobiology of corals – How do host and symbiont interact to provide a highly efficient autotrophic organism that is able to export energy and thereby maintain Coral Reef growth despite high rate of erosion and minimal energy importation? Are some symbionts hosted by corals more parasitic than others – translocating less energy to their hosts? Do some corals cannibalize asexually produced polyps in the interest of promoting genet survival?

2) Effects of elevated temperature and acidification on coral physiology – What alterations do corals undergo on a seasonal basis under elevated temperatures that fall within their Q10 coping range? How do these alterations differ from the effects of temperature above this range? When does bleaching shift from a controlled response that is beneficial for holobiont performance to a detrimental uncontrolled response that leads to “genet” mortality? What are the interactive effects of elevated temperature and atmospheric CO2 on coral physiology?

3) How does climate change affect the productivity of coral reefs? It has been argued that future reefs will be dominated by algae, yet the responses of many algae to a range of projected future climate scenarios has not been fully evaluated. Who will be the winners in the future and will they be able to sustain the large biomass of primary and secondary consumers that currently exist on Reefs?

4) Carbon flow within the coral-dinoflagellate symbiosis and its role in maintaining cellular homeostasis. Estimating rates of carbon fixation and translocation; identifying resultant metabolites; and relating these to cellular processes and cell fates.

5) To what extent are reef-building corals heterotrophic? Are clade D corals more dependent on heterotrophy than other corals? Can symbionts fed on corals taking up organic carbon in addition to inorganic nutrients?

6) How is the balance between reef accretion and erosion affected by the various temperature and acidification scenarios proposed for the end of the century?

 

Qualifications

PhD Biological Sciences, The University of Sydney
MA Philosophy, University of Southern California
MA (Hons) Maths and Philosophy, University of Edinburgh

 

Publications

Book Chapter

Primary Production, Nutrient Recycling and Energy Flow through Coral Reef Ecosystems
Hoegh-Guldberg, Ove and Dove, Sophia Gwendoline (2008). Primary Production, Nutrient Recycling and Energy Flow through Coral Reef Ecosystems. In Patricia Hutchins, Ove Hoegh-Guldberg and Michael John Kingsford (Ed.), The Great Barrier Reef: Biology, Environment and Management (pp. 59-73) Collingwood, Victoria: CSIRO Publishing.

Vulnerability of reef-building corals on the Great Barrier Reef to climate change
Hoegh-Guldberg, O., Anthony, K., Berkelmans, R., Dove, S., Fabricus, K., Lough, J., Marshall, P., van Oppen, M. J. H., Negri, A. and Willis, B. (2007). Vulnerability of reef-building corals on the Great Barrier Reef to climate change. In Johnson, J. E. and Marshall, P. A. (Ed.), Climate Change and the Great Barrier Reef: A Vulnerability Assessment (pp. 271-308) Townsville, Queensland: Great Barrier Reef Marine Park Authority and The Australian Greenhouse Office.

The Cell Physiology of Coral Bleaching
Dove, G. and Hoegh-Guldberg, I O (2006). The Cell Physiology of Coral Bleaching. In Jonathan T. Phinney, Ove Hoegh-Guldberg, Joanie Kleypas and William Skirving and Al Strong (Ed.), Coral Reefs and Climate Change: Science and Management (pp. 55-71) Washington, DC: American Geophysical Union.

Journal Article

Unfolding the secrets of coral-algal symbiosis
Rosic, Nedeljka, Ling, Edmund Yew Siang, Chan, Chon-Kit Kenneth, Lee, Chin Hong, Kaniewska, Paulina, Edwards, David, Dove, Sophia and Hoegh-Guldberg, Ian Ove (2014) Unfolding the secrets of coral-algal symbiosis. The ISME Journal, . doi:10.1038/ismej.2014.182

Relative roles of endolithic algae and carbonate chemistry variability in the skeletal dissolution of crustose coralline algae
Reyes-Nivia, C., Diaz-Pulido, G. and Dove, S. (2014) Relative roles of endolithic algae and carbonate chemistry variability in the skeletal dissolution of crustose coralline algae. Biogeosciences, 11 17: 4615-4626.

Effects of ocean warming and acidification on the energy budget of an excavating sponge
Fang, James K. H., Schönberg, Christine H. L., Mello-Athayde, Matheus A., Hoegh-Guldberg, Ove and Dove, Sophie (2014) Effects of ocean warming and acidification on the energy budget of an excavating sponge. Global Change Biology, 20 4: 1-12.

The impact of CO2 emission scenarios and nutrient enrichment on a common coral reef macroalga is modified by temporal effects
Bender D., Diaz-Pulido G. and Dove S. (2014) The impact of CO2 emission scenarios and nutrient enrichment on a common coral reef macroalga is modified by temporal effects. Journal of Phycology, 50 1: 203-215.

Sponge biomass and bioerosion rates increase under ocean warming and acidification
Fang, James K. H., Mello-Athayde, Matheus A., Schonberg, Christine H. L., Kline, David I., Hoegh-Guldberg, Ove and Dove, Sophie (2013) Sponge biomass and bioerosion rates increase under ocean warming and acidification. Global Change Biology, 19 12: 3581-3591.

Future reef decalcification under a business-as-usual CO2 emission scenario
Dove, Sophie G., Kline, David I., Pantos, Olga, Angly, Florent E., Tyson, Gene W. and Hoegh-Guldberg, Ove (2013) Future reef decalcification under a business-as-usual CO2 emission scenario. Proceedings of the National Academy of Sciences of the United States of America, 110 38: 15342-15347.

Methods to quantify components of the excavating sponge Cliona orientalis Thiele, 1900
Fang, James K. H., Schonberg, Christine H. L., Kline, David I., Hoegh-Guldberg, Ove and Dove, Sophie (2013) Methods to quantify components of the excavating sponge Cliona orientalis Thiele, 1900. Marine Ecology, 34 2: 193-206.

Ocean acidification and warming scenarios increase microbioerosion of coral skeletons
Reyes-Nivia, Catalina, Diaz-Pulido, Guillermo, Kline, David, Guldberg, Ove-Hoegh and Dove, Sophie (2013) Ocean acidification and warming scenarios increase microbioerosion of coral skeletons. Global Change Biology, 19 6: 1919-1929.

New-old hemoglobin-like proteins of symbiotic dinoflagellates
Rosic, Nedeljka N., Leggat, William, Kaniewska, Paulina, Dove, Sophie and Hoegh-Guldberg, Ove (2013) New-old hemoglobin-like proteins of symbiotic dinoflagellates. Ecology and Evolution, 3 4: 822-834.

Effects of macroalgae on corals recovering from disturbance
Bender, Dorothea, Diaz-Pulido, Guillermo and Dove, Sophie (2012) Effects of macroalgae on corals recovering from disturbance. Journal of Experimental Marine Biology and Ecology, 429 15-19.

Thermal priming affects symbiont photosynthesis but does not alter bleaching susceptibility in Acropora millepora
Middlebrook, Rachael, Anthony, Kenneth R. N., Hoegh-Guldberg, Ove and Dove, Sophie (2012) Thermal priming affects symbiont photosynthesis but does not alter bleaching susceptibility in Acropora millepora. Journal of Experimental Marine Biology and Ecology, 432-433 64-72.

A lipidomic approach to understanding free fatty acid lipogenesis derived from dissolved inorganic carbon within cnidarian-dinoflagellate symbiosis
Dunn, Simon R., Thomas, Michael C., Nette, Geoffrey W. and Dove, Sophie G. (2012) A lipidomic approach to understanding free fatty acid lipogenesis derived from dissolved inorganic carbon within cnidarian-dinoflagellate symbiosis. PLoS One, 7 10 Article No.e46801: .

Decline in growth of foraminifer Marginopora rossi under eutrophication and ocean acidification scenarios
Reymond,Claire E., Lloyd, Alicia, Kline, David I., Dove, Sophie G. and Pandolfi, John M. (2012) Decline in growth of foraminifer Marginopora rossi under eutrophication and ocean acidification scenarios. Global Change Biology, 19 1: 291-302.

A single-cell view of ammonium assimilation in coral-dinoflagellate symbiosis
Pernice, Mathieu, Meibom, Anders, Van Den Heuvel, Annamieke, Kopp, Christophe, Domart-Coulon, Isabelle, Hoegh-Guldberg, Ove and Dove, Sophie (2012) A single-cell view of ammonium assimilation in coral-dinoflagellate symbiosis. Isme Journal, 6 7: 1314-1324.

Rapid identification of long-chain polyunsaturated fatty acids in a marine extract by HPLC-MS using data-dependent acquisition
Thomas, Michael C., Dunn, Simon R., Altvater, Jens, Dove, Sophie G. and Nette, Geoffrey W. (2012) Rapid identification of long-chain polyunsaturated fatty acids in a marine extract by HPLC-MS using data-dependent acquisition. Analytical Chemistry, 84 14: 5976-5983.

Thermal stress promotes host mitochondrial degradation in symbiotic cnidarians: are the batteries of the reef going to run out?
Dunn, Simon R., Pernice, Mathieu, Green, Kathryn, Hoegh-Guldberg, Ove and Dove, Sophie G. (2012) Thermal stress promotes host mitochondrial degradation in symbiotic cnidarians: are the batteries of the reef going to run out?. PloS One, 7 7: 39024.1-39024.14.

The effect of temperature stress on coral-Symbiodinium associations containing distinct symbiont types
Fisher, P. L., Malme, M. K. and Dove, S. (2012) The effect of temperature stress on coral-Symbiodinium associations containing distinct symbiont types. Coral Reefs, 31 2: 473-485.

A short-term in situ CO2 enrichment experiment on Heron Island (GBR)
Kline, David I., Teneva, Lida, Schneider, Kenneth, Miard, Thomas, Chai, Aaron, Marker, Malcolm, Headley, Kent, Opdyke, Brad, Nash, Merinda, Valetich, Matthew, Caves, Jeremy K., Russell, Bayden D., Connell, Sean D., Kirkwood, Bill J., Brewer, Peter, Peltzer, Edward, Silverman, Jack, Caldeira, Ken, Dunbar, Robert B., Koseff, Jeffrey R., Monismith, Stephen G., Mitchell, B. Greg, Dove, Sophie and Hoegh-Guldberg, Ove (2012) A short-term in situ CO2 enrichment experiment on Heron Island (GBR). Scientific Reports, 2 413.1-413.9.

Major cellular and physiological impacts of ocean acidification on a reef building coral
Kaniewska, Paulina, Campbell, Paul R., Kline, David I., Rodriguez-Lanetty, Mauricio, Miller, David J., Dove, Sophie and Hoegh-Guldberg, Ove (2012) Major cellular and physiological impacts of ocean acidification on a reef building coral. PLoS One, 7 4: e34659.1-e34659.12.

Interactions Between Ocean Acidification and Warming On the Mortality and Dissolution of Coralline Algae
Diaz-Pulido, Guillermo, Anthony, Kenneth R. N., Kline, David I., Dove, Sophie and Hoegh-Guldberg, Ove (2012) Interactions Between Ocean Acidification and Warming On the Mortality and Dissolution of Coralline Algae. Journal of Phycology, 48 1: 32-39.

The future of coral reefs
Hoegh-Guldberg, Ove, Ortiz, Juan Carlos and Dove, Sophie (2011) The future of coral reefs. Science, 334 6062: 1494-1495.

Mycosporine-like amino acids from coral dinoflagellates
Rosic, Nedeljka N. and Dove, Sophie (2011) Mycosporine-like amino acids from coral dinoflagellates. Applied and Environmental Microbiology, 77 24: 8478-8486.

Adaptive divergence in a scleractinian coral: physiological adaptation of Seriatopora hystrix to shallow and deep reef habitats
Bongaerts, Pim, Riginos, Cynthia, Hay, Kyra B., van Oppen, Madeleine J.H., Hoegh-Guldberg, Ove and Dove, Sophie (2011) Adaptive divergence in a scleractinian coral: physiological adaptation of Seriatopora hystrix to shallow and deep reef habitats. BMC Evolutionary Biology, 11 1: 1-46.

High CO2 enhances the competitive strength of seaweeds over corals
Diaz-Pulido, Guillermo, Gouezo, Marine, Tilbrook, Bronte, Dove, Sophie and Anthony, Kenneth R. N. (2011) High CO2 enhances the competitive strength of seaweeds over corals. Ecology Letters, 14 2: 156-162.

Regulation of apoptotic mediators reveals dynamic responses to thermal stress in the reef building coral Acropora millepora
Pernice, Mathieu, Dunn, Simon R., Miard, Thomas, Dufour, Sylvie, Dove, Sophie and Hoegh-Guldberg, Ove (2011) Regulation of apoptotic mediators reveals dynamic responses to thermal stress in the reef building coral Acropora millepora. PLoS One, 6 1: e16095.1-e16095.13.

Gene expression profiles of cytosolic heat shock proteins Hsp70 and Hsp90 from symbiotic dinoflagellates in response to thermal stress: Possible implications for coral bleaching
Rosic, Nedeljka N., Pernice, Mathieu, Dove, Sophie, Dunn, Simon and Hoegh-Guldberg, Ove (2011) Gene expression profiles of cytosolic heat shock proteins Hsp70 and Hsp90 from symbiotic dinoflagellates in response to thermal stress: Possible implications for coral bleaching. Cell Stress and Chaperones, 16 1: 69-80.

Differential regulation by heat stress of novel cytochrome P450 genes from the dinoflagellate symbionts of reef-building corals
Rosic, Nedeljka N., Pernice, Mathieu, Dunn, Simon, Dove, Sophia and Hoegh-Guldberg, Ove (2010) Differential regulation by heat stress of novel cytochrome P450 genes from the dinoflagellate symbionts of reef-building corals. Applied and Environmental Microbiology, 76 9: 2823-2829.

Heating rate and symbiont productivity are key factors determining thermal stress in the reef-building coral Acropora formosa
Middlebrook, Rachael, Anthony, Kenneth R.N., Hoegh-Guldberg, Ove and Dove, Sophie (2010) Heating rate and symbiont productivity are key factors determining thermal stress in the reef-building coral Acropora formosa. Journal of Experimental Biology, 213 7: 1026-1034.

The effect of ocean acidification on symbiont photorespiration and productivity in Acropora formosa
Crawley, Alicia, Kline, David I., Dunn, Simon, Anthony, Ken and Dove, Sophie (2010) The effect of ocean acidification on symbiont photorespiration and productivity in Acropora formosa. Global Change Biology, 16 2: 851-863.

Photoreactivation is the main repair pathway for UV-induced DNA damage in coral planulae
Reef, R, Dunn, S, Levy, O, Dove, S, Shemesh, E, Brickner, I, Leggat, W and Hoegh-Guldberg, O (2009) Photoreactivation is the main repair pathway for UV-induced DNA damage in coral planulae. Journal of Experimental Biology, 212 17: 2760-2766.

Doom and boom on a resilient reef: Climate change, algal overgrowth and coral recovery
Diaz-Pulido, Guillermo, McCook, Laurence J., Dove, Sophie, Berkelmans, Ray, Roff, George, Kline, David I., Weeks, Scarla, Evans, Richard D., Williamson, David H. and Hoegh-Guldberg, Ove (2009) Doom and boom on a resilient reef: Climate change, algal overgrowth and coral recovery. PLoS One, 4 4: e5239.1-e5239.9.

Mesenterial filaments make a clean sweep of substrates for coral growth
Roff, G., Dove, S. G. and Dunn, S. R. (2009) Mesenterial filaments make a clean sweep of substrates for coral growth. Coral Reefs, 28 1: 79-79.

Cohesive molecular genetic data delineate species diversity in the dinoflagellate genus Symbiodinium
Sampayo, EM, Dove, S and Lajeunesse, TC (2009) Cohesive molecular genetic data delineate species diversity in the dinoflagellate genus Symbiodinium. MOLECULAR ECOLOGY, 18 3: 500-519.

Ocean acidification causes bleaching and productivity loss in coral reef builders
Anthony, K. R. N., Kline, D. I., Diaz-Pulido, G., Dove, S. and Hoegh-Guldberg, O. (2008) Ocean acidification causes bleaching and productivity loss in coral reef builders. Proceedings of the National Academy of Sciences of the United States of America, 105 45: 17442-17446.

Host pigments: Potential facilitators of photosynthesis in coral symbioses
Dove, Sophie G., Lovell, Carli, Fine, Maoz, Deckenback, Jeffrey, Hoegh-Guldberg, Ove, Iglesias-Prieto, Roberto and Anthony, Kenneth R.N. (2008) Host pigments: Potential facilitators of photosynthesis in coral symbioses. Plant, Cell and Environment, 31 11: 1523-1533.

Analytical approach for selecting normalizing genes from a cDNA microarray platform to be used in q-RT-PCR assays: a cnidarian case study
Rodriguez-Lanetty, Mauricio, Phillips, Wendy S., Dove, Sophie, Hoegh-Guldberg, Ove and Weis, Virginia M. (2008) Analytical approach for selecting normalizing genes from a cDNA microarray platform to be used in q-RT-PCR assays: a cnidarian case study. Journal of Biochemical and Biophysical Methods, 70 6: 985-991.

Gene expression of a green fluorescent protein homolog as a host-specific biomarker of heat stress within a reef-building coral
Smith-Keune, C. and Dove, S. (2008) Gene expression of a green fluorescent protein homolog as a host-specific biomarker of heat stress within a reef-building coral. Marine Biotechnology, 10 2: 166-180.

Ultraviolet sunscreens in reef fish mucus
Eckes, M. J., Siebeck, U. E., Dove, S. G. and Grutter, A. S. (2008) Ultraviolet sunscreens in reef fish mucus. Marine Ecology Progress Series, 353 203-211.

Analysis of an EST library from the dinoflagellate (Symbiodinium sp.) symbiont of reef-building corals
Leggat, W., Hoegh-Guldberg, O., Dove, S. and Yellowlees, D. (2007) Analysis of an EST library from the dinoflagellate (Symbiodinium sp.) symbiont of reef-building corals. Journal of Phycology, 43 5: 1010-1021.

The hologenome theory disregards the coral holobiont
Leggat, William, Ainsworth, Tracy, Bythell, John, Dove, Sophie, Gates, Ruth, Hoegh-Guldberg, Ove, Iglesias-Prieto, Roberto and Yellowlees, David (2007) The hologenome theory disregards the coral holobiont. Nature Reviews Microbiology, 5 10: .

Niche partitioning of closely related symbiotic dinoflagellates
Sampayo, Eugenia M., Franceschinis, Lorenzo, Hoegh-Guldberg, Ove and Dove, Sophie (2007) Niche partitioning of closely related symbiotic dinoflagellates. Molecular Ecology, 16 17: 3721-3733.

A structural basis for the pH-dependent increase in fluorescence efficiency of chromoproteins
Battad, J. M., Wilmann, P. G., Olsen, S. C., Byres, E., Smith, S. C., Dove, S. G., Turcic, K. N., Devenish, R. J., Rossjohn, J. and Prescott, M. (2007) A structural basis for the pH-dependent increase in fluorescence efficiency of chromoproteins. Journal of Molecular Biology, 368 4: 998-1010.

The 2.0 angstrom crystal structure of a pocilloporin at pH 3.5: The structural basis for the linkage between color transition and halide binding
Wilmann, P. G., Battad, J., Beddoe, T., Olsen, S., Smith, S. C., Dove, S., Devenish, R. J., Rossjohn, J. and Prescott, M. (2006) The 2.0 angstrom crystal structure of a pocilloporin at pH 3.5: The structural basis for the linkage between color transition and halide binding. Photochemistry And Photobiology, 82 2: 359-366.

Aerial exposure influences bleaching patterns
Leggat, W, Ainsworth, TD, Dove, S and Hoegh-Guldberg, O (2006) Aerial exposure influences bleaching patterns. Coral Reefs, 25 3: 452-452.

Amino acid substitutions around the chromophore of the chromoprotein Rtms5 influence polypeptide cleavage
Turcic, Kristina, Pettikiriarachchi, Anne, Battad, Jion, Wilmann, Pascal G., Rossjohn, Jamie, Dove, Sophie G., Devenish, Rodney J. and Prescott, Mark (2006) Amino acid substitutions around the chromophore of the chromoprotein Rtms5 influence polypeptide cleavage. Biochemical And Biophysical Research Communications, 340 4: 1139-1143.

Physiological and genetic properties of two fluorescent colour morphs of the coral Montipora digitata
Klueter, A., Loh, W., Hoegh-Guldberg, O. and Dove, S. (2006) Physiological and genetic properties of two fluorescent colour morphs of the coral Montipora digitata. Symbiosis, 42 3: 123-134.

Response of holosymbiont pigments from the scleractinian coral Montipora monasteriata to short-term heat stress
Dove, Sophie, Ortiz, Juan Carlos, Enriquez, Susana, Fine, Maoz, Fisher, Paul, Iglesias-Prieto, Roberto, Thornhill, Dan and Hoegh-Guldberg, Ove (2006) Response of holosymbiont pigments from the scleractinian coral Montipora monasteriata to short-term heat stress. Limnology And Oceanography, 51 2: 1149-1158.

The 2.1 angstrom crystal structure of copGFP, a representative member of the copepod clade within the green fluorescent protein superfamily
Wilmann, P. G., Battad, J., Petersen, J., Wilce, M. C. J., Dove, S., Devenish, R. J., Prescott, M. and Rossjohn, J. (2006) The 2.1 angstrom crystal structure of copGFP, a representative member of the copepod clade within the green fluorescent protein superfamily. Journal of Molecular Biology, 359 4: 890-900.

Coral bleaching following wintry weather
Hoegh-Guldberg, O., Fine, M., Skirving, W., Johnstone, R., Dove, S. and Strong, A. (2005) Coral bleaching following wintry weather. Limnology And Oceanography, 50 1: 265-271.

Scleractinian corals with photoprotective host pigments are hypersensitive to thermal bleaching
Dove, S. (2004) Scleractinian corals with photoprotective host pigments are hypersensitive to thermal bleaching. Marine Ecology-progress Series, 272 99-116.

The 2.2 A crystal structure of a pocilloporin pigment reveals a nonplanar chromophore conformation
Prescott, M., Ling, M., Beddoe, T., Oakley, A. J., Dove, S., Hoegh-Guldberg, O., Devenish, R. J. and Rossjohn, J. (2003) The 2.2 A crystal structure of a pocilloporin pigment reveals a nonplanar chromophore conformation. Structure, 11 3: 275-284.

The production, purification and crystallization of a pocilloporin pigment from a reef-forming coral
Beddoe, T., Ling, M., Dove, S., Hoegh-Guldberg, O., Devenish, R. J., Prescott, M. and Rossjohn, J. (2003) The production, purification and crystallization of a pocilloporin pigment from a reef-forming coral. Acta Crystallographica Section D-biological Crystallography, 59 3: 597-599.

Major colour patterns of reef-building corals are due to a family of GFP-like proteins
Dove, S. G., Hoegh-Guldberg, O. and Ranganathan, S. (2001) Major colour patterns of reef-building corals are due to a family of GFP-like proteins. Coral Reefs, 19 3: 197-204.

Ontological changes in the crystallin composition of the eye lenses of the territorial damselfish Parma microlepis and their possible effects on trace-metal accumulation
Dove, SG (1999) Ontological changes in the crystallin composition of the eye lenses of the territorial damselfish Parma microlepis and their possible effects on trace-metal accumulation. Marine Biology, 134 4: 653-663.

Use of otoliths and eye lenses for measuring trace-metal incorporation in fishes: a biogeographic study
Dove, SG and Kingsford, MJ (1998) Use of otoliths and eye lenses for measuring trace-metal incorporation in fishes: a biogeographic study. Marine Biology, 130 3: 377-387.

Isolation and partial characterisation of the pink and blue pigments of Pocilloporid and Acroporid corals
Dove, SG, Takabayashi, M and HoeghGuldberg, O (1995) Isolation and partial characterisation of the pink and blue pigments of Pocilloporid and Acroporid corals. Biological Bulletin, 189 3: 288-297.

A biochemical characterisation of the photophore lenses of Porichthys notatus Girard
Dove, S., Horwitz, J. and McFall-Ngai, M. (1992) A biochemical characterisation of the photophore lenses of Porichthys notatus Girard. Journal of Comparative Physiology A: Neuroethology, Sensory, Neural, and Behavioral Physiology, 172 5: 565-565.

Conference Publication

Effect of past and future Co2 emission scenarios and eutrophication on the common coral reef alga chnoospora implexa
Bender, D., Diaz-Pulido, G. and Dove, S. (2013). Effect of past and future Co2 emission scenarios and eutrophication on the common coral reef alga chnoospora implexa. In: M. Dennis Hanisak, James A. Nienow and Akshinthala K. S. K. Prasad, Abstracts of Papers to be Presented at the 10th International Phycological Congress. 10th International Phycological Congress, Orlando, Florida, United States, (9-9). 4-10 August 2013.

How can dinoflagellates help in reducing coral reef vulnerability to environmental stress?
Rosic, N. and Dove, S. (2013). How can dinoflagellates help in reducing coral reef vulnerability to environmental stress?. In: M. Dennis Hanisak, James A. Nienow and Akshinthala K. S. K. Prasad, Abstracts of Papers to be Presented at the 10th International Phycological Congress. 10th International Phycological Congress, Orlando, Florida, United States, (94-94). 4-10 August 2013.

Differential Regulation of Heat Shock Proteins and Cytochrome P450 Genes in Symbiotic Dinoflagellates Under Thermal Stress
Rosic, Nela, Pernice, Mathieu, Hoegh-Guldberg, Ove and Dove, Sophie (2011). Differential Regulation of Heat Shock Proteins and Cytochrome P450 Genes in Symbiotic Dinoflagellates Under Thermal Stress. In: Fifth European Phycological Congress: EPC5 Programme and Abstracts. 5th European Phycological Congress, Rhodes, Greece, (145-145). 04-09 September 2011.

Transcriptomics of the coral-algal symbiosis in response to environmental stress
Rosic, Nela, Kaniewska, Pauline, Ling, Edmund, Edwards, David, Dove, Sophie and Hoegh-Guldberg, Ove (2011). Transcriptomics of the coral-algal symbiosis in response to environmental stress. In: Fifth European Phycological Congress: EPC5 Programme and Abstracts. 5th European Phycological Congress, Rhodes, Greece, (97-97). 04-09 September 2011.

The coral proto free ocean carbon enrichment system (CP-FOCE): Engineering and development
Marker, Malcolm, Kline, D.I., Kirkwood, W.J., Headley, K., Brewer, P.G., Peltzer, E.T., Miard, T., Chai, A., James, M., Schneider, K., Silverman, J., Caldeiara, K., Koseff, J.R., Monismith, S., Opdyke, B., Dunbar, R., White, R., Dove, S. and Hoegh-Guldberg, O. (2010). The coral proto free ocean carbon enrichment system (CP-FOCE): Engineering and development. In: Proceedings of OCEANS 2010 IEEE. OCEANS 2010 IEEE – Sydney, Sydney, Australia, (1-10). 24-27 May 2010.

All-protein chromophores isolated from corals, quench superoxide radicals
Dove, S., Hoegh-Gulderg, O. and Lesser, M. (2006). All-protein chromophores isolated from corals, quench superoxide radicals. In: Comparative Biochemistry and Physiology – Part A: Molecular & Integrative Physiology: Abstracts of the Annual Main Meeting of the Society for Experimental Biology, University of Kent at Canterbury, UK, 2nd-7th April, 2006. Annual Main Meeting of the Society for Experimental Biology, University of Kent at Canterbury, United Kingdom, (S132-S132). 2-7 April, 2006.

The molecular ecology of colour in reef-building corals
Dove, S. G. and Hoegh-Guldberg, I.O. (2001). The molecular ecology of colour in reef-building corals. In: Australian Coral Reef Society, Magnetic Island International Hotel, Queensland, (). 6-9th July.

Dissolved free amino acid (DFAA) concentrations in Great Barrier Reef waters: the implications for the role of DFAA transport by Acanthaster planci.
Dove, Sophie G., Hoegh-Guldberg, Ove and Siggaard, Dorthe (1997). Dissolved free amino acid (DFAA) concentrations in Great Barrier Reef waters: the implications for the role of DFAA transport by Acanthaster planci.. In: Proceedings of the Eight International Coral Reef Symposium. Eight International Coral Reef Symposium, Panama City, (1237-1241). 24-29 June 1996.

Convergence in the Photophore and Eye Lenses of the Midshipman Fish
Dove, S, Horwitz, J and McFallngai, M (1991). Convergence in the Photophore and Eye Lenses of the Midshipman Fish. In: American Zoologist. , , (A96-A96). .

Convergence in the photophore and eye lenses of the midshipman fish
Dove, S., Horwitz, J. and McFallngai, M. (1991). Convergence in the photophore and eye lenses of the midshipman fish. In: American Zoologist. Proceedings of: Annual Meeting of The American Society of Zoologists, American Microscopical Society, Animal Behavior Society, The Crustacean Society and The International Association of Astacology. Annual Meeting of The American Society of Zoologists, American Microscopical Society, Animal Behavior Society, The Crustacean Society and The International Association of Astacology, Atlanta, Georgia, USA, (96A-96A). 27-30 December 1991.

Other Outputs

Cell Visualising characteristic modifying sequences
Jones, E. L., Karan, M., Brugliera, F., Mason, J., Dove, S. G., Hoegh-Guldberg, I.O. and Prescott, M. (2002). Cell Visualising characteristic modifying sequences. PCT/GB02/00928 & WO 02/070703 A2.

Pigment Protein From Coral Tissue
Dove, S. and Hoegh-Guldberg, O . (2000). Pigment Protein From Coral Tissue. WO/2000/046233.

Categories
People Uncategorised

Dr Manuel González-Rivero

Categories
People Uncategorised

Dr Andreas Kubicek

AK_color My research focus is on ecosystem functions, processes and relationships in coral reef communities. Reef systems feature complex interaction structures among associated organisms, often causing non-linear responses to change which are hard to trace with traditional ecological methods, alone. I use spatially explicit, individual based modelling to integrate current knowledge and simulate benthic coral reef communities under the influence of various sources of environmental change, such as ever increasing carbon dioxide concentrations and temperatures, as well as frequencies and intensities of extreme events (e.g. hurricanes). Model outcomes shall complement ongoing science on coral reef functioning, help to identify gaps, and aid to scrutinize potential management plans and actions in globally changing environments.

ReefView_siccom
The simulation of small-scale processes allows the analysis of ecosystem responses to environmental change. Colonies of two massive (polygons) and two branching (stars) coral species compete for space with each other and algae (macroalgae as green spots; turf algae as grid). Higher level properties, such as population dynamics and community composition, emerge from local interactions of neighboring organisms, which are additionally influenced by environmental conditions.

Publications

Kubicek A, Reuter H (2016) Mechanics of multiple feedbacks in benthic coral reef communities. Ecological Modelling 329, 29–40

Kubicek A, Jopp F, Breckling B, Lange C, Reuter H (2015), Context-oriented model validation of individual-based models in ecology: A hierarchically structured approach to validate qualitative, compositional and quantitative characteristics. Ecological Complexity 22, 178-191

Kubicek A, Muhando C, Reuter H (2012) Simulations of long-term community dynamics in coral reefs how perturbations shape trajectories. PLoS Computational Biology. 8(11): e1002791. doi:10.1371/journal.pcbi.1002791

Kubicek A and Borell E (2011) Modelling resilience and phase shifts in coral reefs: application of different modeling approaches. In: Modelling Complex Ecological Dynamics. Jopp F, Reuter H, Breckling B (Eds.) Springer, New York, Berlin, Chapter 17.

Kubicek A, Bessho K, Nakaoka M, Wahl M and Lenz M (2011) Inducible defence and its modulation by environmental stress in the red alga Chondrus yendoi (Yamada and Mikami in Mikami, 1965) from Honshu Island, Japan. Journal of Experimental Marine Biology and Ecology, 397(2): 208213.

Categories
People Uncategorised

Dr Dorothea Bender-Champ

 

IMG_7741

Dorothea is originally from Germany, where she completed her MSc in Biology at the University of Bremen. Dorothea was a PhD student at the Coral Reef Ecosystems Lab at UQ and investigated the effects of elevated sea surface temperature and ocean acidification on coral reef algae (supervisors: Sophie Dove and Guillermo Diaz-Pulido). She included various growth forms and taxa in her experiments, looked at turf algal communities as well as macroalgal responses to the changed environmental conditions.

L. intricata at Heron Island reef flat (D. Bender-Champ, CC-BY-SA)
L. intricata at Heron Island reef flat (D. Bender-Champ, CC-BY-SA)

After working as a project manager on the development of a MOOC (massive open online course) at the Global Change Institute, she re-joined the Coral Reef Ecosystems Lab in 2014 as a postdoctoral research fellow. Dorothea’s current research focuses on coral reef metabolism, mainly in terms of productivity and calcification, and how it varies between distinct reef zones. She is also interested in how coral reef metabolism will be affected by future conditions.

This YouTube video of Seaview 360 features some of our work.

 

 

Publications:

Bender D, Champ CM, Kline D, Diaz-Pulido G, Dove S (2015) Effects of “Reduced” and “Business-As-Usual” CO2 Emission Scenarios on the Algal Territories of the Damselfish Pomacentrus wardi (Pomacentridae). Plos One, 10, e0131442. Link to full text or pdf

Diaz-Pulido G, Nash MC, Anthony KRN, Bender D, Opdyke BN, Reyes-Nivia C, Troitzsch U (2014) Greenhouse conditions induce mineralogical changes and dolomite accumulation in coralline algae on tropical reefs. Nature Communications, 5. Link to full text or pdf

Reef flat community at Heron Island reef (D. Bender-Champ, CC-BY-SA)
Reef flat community at Heron Island reef (D. Bender-Champ, CC-BY-SA)

Bender D, Diaz-Pulido G, Dove S (2014) The impact of CO2 emission scenarios and nutrient enrichment on a common coral reef macroalga is modified by temporal effects. Journal of  Phycology, 50, 203-215. Link to full text or pdf

Bender D, Diaz-Pulido G, Dove S (2014) Warming and acidification promote cyanobacterial dominance in turf algal assemblages. Mar Ecol Prog Ser 517: 271-284. Link to full text or pdf

Bender D, Diaz-Pulido G, Dove S (2012) Effects of macroalgae on corals recovering from disturbance. Journal of Experimental Marine Biology and Ecology, 429, 15-19. Link to full text or pdf

 

 

 

Testing new equipment (G. Bernal Carillo, CC-BY-SA)
Testing new equipment (G. Bernal Carillo, CC-BY-SA)
CTD at the inner reef flat site (D.Bender-Champ CC-BY-SA)
CTD at the inner reef flat site (D.Bender-Champ CC-BY-SA)